RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA630877" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA630877 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
603085 603085 PRJNA630877_S_NODE_74721_length_322_cov_1.658363_g55584_i0 PRJNA630877 74721 322 1.658363 5.33992886 Sunflower rust-associated mitovirus 1 2761498 Viruses Viruses 263 1.28e-65   NTclustered gi|1886953899|gb|MT860451.1| 2761498 g55584 i0 81.595 1.01242236024845 326 52 100 6 1 322 588 909 Sunflower rust-associated mitovirus 1 isolate sunflower_SDSU RNA-dependent RNA polymerase gene, partial cds blastn 326 263 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Sunflower rust-associated mitovirus 1
9531615 9531615 PRJNA630877_S_NODE_150028_length_158_cov_1.504274_g130891_i0 PRJNA630877 150028 158 1.5042739999999999 2.37675292 Puccinia striiformis totivirus 2 2045190 Viruses Viruses 148 1.6199999999999998e-31   NTclustered gi|1270116609|gb|KY207362.1| 2045190 g130891 i0 84.416 0.974683544303797 154 21 97 3 1 153 3776 3625 Puccinia striiformis totivirus 2 isolate CYR32 putative capsid protein (CP) gene, complete cds; and putative RNA-dependent RNA polymerase (RdRp) gene, partial cds blastn 154 148 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Puccinia striiformis totivirus 2
10807294 10807294 PRJNA630877_S_NODE_110049_length_206_cov_1.515152_g90912_i0 PRJNA630877 110049 206 1.515152 3.12121312 Ripodos virus 3130450 Viruses Viruses 67.6 6.43e-7   NTclustered gi|2717319779|gb|PP172752.1| 3130450 g90912 i0 93.478 1.0631067961165 46 2 22 1 1 45 2349 2304 MAG: Ripodos virus isolate KCAP1_k141_482780 genomic sequence blastn 219 67.6 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae   Ripodos virus
13357326 13357326 PRJNA630877_S_NODE_72911_length_333_cov_1.304795_g53774_i0 PRJNA630877 72911 333 1.304795 4.34496735 Sunflower rust-associated mitovirus 1 2761498 Viruses Viruses 287 7.9e-73   NTclustered gi|1886953899|gb|MT860451.1| 2761498 g53774 i0 83.548 0.930930930930931 310 47 92 3 3 310 1685 1378 Sunflower rust-associated mitovirus 1 isolate sunflower_SDSU RNA-dependent RNA polymerase gene, partial cds blastn 310 287 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Sunflower rust-associated mitovirus 1
18455175 18455175 PRJNA630877_S_NODE_114515_length_198_cov_2.216561_g95378_i0 PRJNA630877 114515 198 2.216561 4.38879078 Sunflower rust-associated mitovirus 1 2761498 Viruses Viruses 154 4.5700000000000005e-33   NTclustered gi|1886953899|gb|MT860451.1| 2761498 g95378 i0 85.235 0.752525252525252 149 22 75 0 21 169 1925 1777 Sunflower rust-associated mitovirus 1 isolate sunflower_SDSU RNA-dependent RNA polymerase gene, partial cds blastn 149 154 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Sunflower rust-associated mitovirus 1
18455186 18455186 PRJNA630877_S_NODE_75595_length_317_cov_1.576087_g56458_i0 PRJNA630877 75595 317 1.576087 4.99619579 Sunflower rust-associated mitovirus 1 2761498 Viruses Viruses 224 5.949999999999999e-54   NTclustered gi|1886953899|gb|MT860451.1| 2761498 g56458 i0 79.56 1.00315457413249 318 61 99 3 1 316 1004 1319 Sunflower rust-associated mitovirus 1 isolate sunflower_SDSU RNA-dependent RNA polymerase gene, partial cds blastn 318 224 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Sunflower rust-associated mitovirus 1
18455191 18455191 PRJNA630877_S_NODE_90115_length_255_cov_1.439252_g70978_i0 PRJNA630877 90115 255 1.439252 3.6700926 Bacteriophage sp. 38018 Viruses Viruses 52.8 0.023   NTclustered gi|2293644551|gb|OP073625.1| 38018 g70978 i0 100 0.235294117647059 28 0 11 0 73 100 6995 7022 MAG: Bacteriophage sp. isolate 1010_5964, partial genome blastn 60 52.8 1 Viruses               Bacteriophage sp.
22829181 22829181 PRJNA630877_S_NODE_121598_length_188_cov_1.435374_g102461_i0 PRJNA630877 121598 188 1.435374 2.69850312 Viruses 10239 Viruses Viruses 62.1 2.68e-5   NTclustered gi|2056797228|tpg|BK057247.1| 38018 g102461 i0 95 9.39893617021277 40 1 21 1 144 182 42085 42124 MAG TPA_asm: Bacteriophage sp. isolate ctXuM5, partial genome blastn 1767 62.1 1 Viruses               Bacteriophage sp.
24829371 24829371 PRJNA630877_S_NODE_111900_length_202_cov_131.776398_g92763_i0 PRJNA630877 111900 202 131.776398 266.18832396 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 132 2.2e-26   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g92763 i0 100 2.97524752475248 71 0 35 0 127 197 71 1 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 601 132 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;