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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA630877" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJNA630877 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4430823 4430823 PRJNA630877_S_NODE_45484_length_650_cov_12.014778_g27139_i1 PRJNA630877 45484 650 12.014778 78.096057 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 989 0   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g27139 i1 94.172 106.669230769231 652 33 99 5 3 650 3558777 3558127 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 69335 989 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
5706716 5706716 PRJNA630877_S_NODE_103945_length_218_cov_2.231638_g84808_i0 PRJNA630877 103945 218 2.231638 4.86497084 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 331 2.21e-86   NTclustered gi|2874253885|emb|OY970060.1| 171953 g84808 i0 94.037 18.8073394495413 218 13 100 0 1 218 4841925 4841708 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 blastn 4100 331 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
6981553 6981553 PRJNA630877_S_NODE_111546_length_203_cov_1.956790_g92409_i0 PRJNA630877 111546 203 1.95679 3.9722837 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 261 2.7000000000000007e-65   NTclustered gi|2874253885|emb|OY970060.1| 171953 g92409 i0 89.756 128.320197044335 205 19 100 2 1 203 4840574 4840778 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 blastn 26049 261 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
6981560 6981560 PRJNA630877_S_NODE_156466_length_153_cov_1.178571_g137329_i0 PRJNA630877 156466 153 1.178571 1.80321363 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 250 4.14e-62   NTclustered gi|2874253796|emb|OY969780.1| 194844 g137329 i0 96.078 61.5882352941176 153 6 100 0 1 153 285252 285100 MAG: uncultured Acidobacteriaceae bacterium isolate MFD09603.bin.c.4 genome assembly, chromosome: 1 blastn 9423 250 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
10807316 10807316 PRJNA630877_S_NODE_91489_length_250_cov_7.947368_g72352_i0 PRJNA630877 91489 250 7.947368 19.86842 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 285 2.05e-72   NTclustered gi|76574293|gb|DQ139441.1| 171953 g72352 i0 87.449 309.188 247 31 99 0 4 250 305 59 Uncultured Acidobacteria bacterium clone CAL1 23S ribosomal RNA gene, partial sequence blastn 77297 285 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
12082562 12082562 PRJNA630877_S_NODE_160690_length_150_cov_1.165138_g141553_i0 PRJNA630877 160690 150 1.165138 1.747707 Edaphobacter paludis 3035702 Bacteria Bacteria 250 4.04e-62   NTclustered gi|2737763816|gb|CP121194.1| 3035702 g141553 i0 96.667 52.14 150 5 100 0 1 150 661304 661155 Edaphobacter paludis strain DSM 109919 chromosome, complete genome blastn 7821 250 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter paludis
12630827 12630827 PRJNA630877_S_NODE_45590_length_648_cov_12.257002_g27667_i0 PRJNA630877 45590 648 12.257002 79.42537296 Pseudomonadati 3379134 Bacteria Bacteria 946 0   NTclustered gi|2874253750|emb|OY969625.1| 194844 g27667 i0 93.077 108.983024691358 650 40 100 5 1 648 2136 1490 MAG: uncultured Acidobacteriaceae bacterium isolate MFD09495.bin.1.66 genome assembly, chromosome: 1 blastn 70621 946 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
15905941 15905941 PRJNA630877_S_NODE_71953_length_338_cov_14.158249_g52816_i0 PRJNA630877 71953 338 14.158249 47.85488162 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 501 2.64e-137   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g52816 i0 93.491 107.532544378698 338 21 100 1 1 338 3558114 3558450 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 36346 501 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
18455190 18455190 PRJNA630877_S_NODE_84775_length_274_cov_1.158798_g65638_i0 PRJNA630877 84775 274 1.158798 3.17510652 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 385 2.18e-102   NTclustered gi|338189354|gb|JF989862.1| 171953 g65638 i0 92.593 77.3576642335766 270 16 98 3 1 268 225 492 Uncultured Acidobacteria bacterium clone Paddy_500_9163 16S ribosomal RNA gene, partial sequence blastn 21196 385 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
22280241 22280241 PRJNA630877_S_NODE_88018_length_262_cov_1.597285_g68881_i0 PRJNA630877 88018 262 1.597285 4.1848867 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 316 7.679999999999998e-82   NTclustered gi|217038907|gb|EU810998.1| 171953 g68881 i0 89.147 136.629770992366 258 22 97 6 1 255 332 78 Uncultured Acidobacteria bacterium clone 01QCK 23S ribosomal RNA gene, partial sequence blastn 35797 316 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;