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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA630877" and tax_clade = "Sar"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Sar · 10 ✖

bioproject 1

  • PRJNA630877 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
603079 603079 PRJNA630877_S_NODE_62921_length_409_cov_7.494565_g43790_i0 PRJNA630877 62921 409 7.494565 30.65277085 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 124 8.209999999999998e-24   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g43790 i0 82.192 5.5721271393643 146 24 35 2 251 395 3835 3691 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 2279 124 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
1879285 1879285 PRJNA630877_S_NODE_46422_length_632_cov_8.632826_g28338_i0 PRJNA630877 46422 632 8.632826 54.55946032 Chlorarachniophyceae sp. ISRO89-6A 647106 SAR_Eukaryotes SAR_Eukaryotes 185 5.93e-42   NTclustered gi|1253992820|dbj|LC257668.1| 647106 g28338 i0 78.176 40.4430379746835 307 55 47 10 331 630 1628 1929 Chlorarachniophyceae sp. ISRO89-6A gene for 28S ribosomal RNA, partial sequence blastn 25560 185 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae       Chlorarachniophyceae sp. ISRO89-6A
1879293 1879293 PRJNA630877_S_NODE_92182_length_248_cov_2.685990_g73045_i0 PRJNA630877 92182 248 2.68599 6.6612552 Cercomonas sp. 1979794 SAR_Eukaryotes SAR_Eukaryotes 274 4.399999999999999e-69   NTclustered gi|2651357794|gb|PP174308.1| 1979794 g73045 i0 87.243 98.2701612903226 243 28 98 3 1 242 3672 3912 Cercomonas sp. isolate JGP5 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 24371 274 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp.
4430812 4430812 PRJNA630877_S_NODE_124944_length_183_cov_7.528169_g105807_i0 PRJNA630877 124944 183 7.528169 13.77654927 Trachelocorythion pulchellum 178364 SAR_Eukaryotes SAR_Eukaryotes 115 1.9600000000000003e-21   NTclustered gi|83034982|gb|DQ211611.1| 178364 g105807 i0 78.61 158.355191256831 187 31 100 8 1 183 284 465 Trachelocorythion pulchellum 28S ribosomal RNA gene, partial sequence blastn 28979 115 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Sphenoderiidae Trachelocorythion Trachelocorythion pulchellum
4430815 4430815 PRJNA630877_S_NODE_148424_length_159_cov_2.237288_g129287_i0 PRJNA630877 148424 159 2.237288 3.55728792 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 171 3.479999999999999e-38   NTclustered gi|238617605|gb|FJ973380.1| 45107 g129287 i0 86.538 95.2327044025157 156 19 97 2 5 159 1441 1595 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 15142 171 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
5706718 5706718 PRJNA630877_S_NODE_121165_length_188_cov_3.068027_g102028_i0 PRJNA630877 121165 188 3.068027 5.76789076 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 230 6.929999999999999e-56   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g102028 i0 91.617 76.3191489361702 167 13 89 1 3 169 3691 3856 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 14348 230 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
6981556 6981556 PRJNA630877_S_NODE_129066_length_178_cov_6.532847_g109929_i0 PRJNA630877 129066 178 6.532847 11.62846766 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 263 6.39e-66   NTclustered gi|88792583|gb|DQ386164.1| 372086 g109929 i0 93.296 100.466292134831 179 11 100 1 1 178 1209 1387 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 17883 263 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
9531622 9531622 PRJNA630877_S_NODE_63908_length_400_cov_6.579387_g44777_i0 PRJNA630877 63908 400 6.579387 26.317548 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 424 7.05e-114   NTclustered gi|149790271|gb|EF441984.1| 175275 g44777 i0 86.098 57.9225 410 38 100 15 1 400 480 80 Uncultured cercozoan clone G2_18E_51 16S ribosomal RNA gene, partial sequence blastn 23169 424 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
19729729 19729729 PRJNA630877_S_NODE_127396_length_180_cov_3.374101_g108259_i0 PRJNA630877 127396 180 3.374101 6.0733818 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 169 1.4499999999999998e-37   NTclustered gi|238617605|gb|FJ973380.1| 45107 g108259 i0 83.784 6.37222222222222 185 23 100 5 1 180 2195 2377 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 1147 169 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
21005509 21005509 PRJNA630877_S_NODE_117597_length_193_cov_8.263158_g98460_i0 PRJNA630877 117597 193 8.263158 15.94789494 Phytocercomonas venanatans 2065209 SAR_Eukaryotes SAR_Eukaryotes 139 1.2399999999999999e-28   NTclustered gi|1315527750|gb|MF034900.1| 2065209 g98460 i0 91.262 67.1088082901554 103 7 53 2 1 102 8747 8848 Phytocercomonas venanatans 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 12952 139 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Phytocercomonas Phytocercomonas venanatans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;