RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA630162" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA630162 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13356836 13356836 PRJNA630162_P_NODE_76611_length_205_cov_3.826923_g75088_i0 PRJNA630162 76611 205 3.826923 7.84519215 Alphacytorhabdovirus daphnis 3426130 Viruses Viruses 230 7.71e-56   NTclustered gi|2418194617|gb|OP180101.1| 3002498 g75088 i0 85.648 1.05365853658537 216 14 97 1 7 205 9172 8957 Daphne virus 1 isolate SK, complete genome blastn 216 230 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Alphacytorhabdovirus Alphacytorhabdovirus daphnis
21004816 21004816 PRJNA630162_P_NODE_52157_length_244_cov_1.800000_g50634_i0 PRJNA630162 52157 244 1.8 4.392 Bunyaviricetes sp. 3240187 Viruses Viruses 122 1.6499999999999995e-23   NTclustered gi|2846847132|gb|PQ521543.1| 3240187 g50634 i0 80 0.69672131147541 170 30 69 4 8 175 2783 2950 MAG: Bunyaviricetes sp. isolate Havel bunya-like virus 1 MR644-18E/103 genomic sequence blastn 170 122 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes       Bunyaviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;