RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA630162" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA630162 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
601383 601383 PRJNA630162_P_NODE_108281_length_180_cov_10.412214_g106758_i0 PRJNA630162 108281 180 10.412214 18.7419852 Myriotrochus sp. AKM-2016 1902928 Echinodermata other_Eukaryota 180 6.71e-41   NTclustered gi|1160550711|gb|KX856867.1| 1902928 g106758 i0 88.079 83.8777777777778 151 18 84 0 1 151 413 563 Myriotrochus sp. AKM-2016 voucher NIWA:37812 28S ribosomal RNA gene, partial sequence blastn 15098 180 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Apodida Myriotrochidae Myriotrochus Myriotrochus sp. AKM-2016
10807046 10807046 PRJNA630162_P_NODE_97409_length_187_cov_1.724638_g95886_i0 PRJNA630162 97409 187 1.724638 3.22507306 Diadema antillarum 105358 Echinodermata other_Eukaryota 128 2.59e-25   NTclustered gi|2919565827|ref|XM_071625415.1| 105358 g95886 i0 91.489 46.4866310160428 94 6 49 1 96 187 1300 1207 PREDICTED: Diadema antillarum actin, cytoskeletal (LOC139713710), mRNA blastn 8693 128 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
12081777 12081777 PRJNA630162_P_NODE_50250_length_249_cov_1.015000_g48727_i0 PRJNA630162 50250 249 1.015 2.52735 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 172 1.66e-38   NTclustered gi|2037931621|ref|XM_041597485.1| 7654 g48727 i0 86.538 62.3253012048193 156 21 63 0 10 165 313 158 PREDICTED: Lytechinus variegatus histone H3, embryonic (LOC121406474), mRNA blastn 15519 172 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
18454348 18454348 PRJNA630162_P_NODE_44895_length_264_cov_2.260465_g43372_i0 PRJNA630162 44895 264 2.260465 5.9676276 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 67.6 8.61e-7   NTclustered gi|1752380844|ref|XM_030993632.1| 7668 g43372 i0 90.196 0.193181818181818 51 5 19 0 156 206 293 243 PREDICTED: Strongylocentrotus purpuratus mucin-2-like (LOC115927571), mRNA blastn 51 67.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
21004017 21004017 PRJNA630162_P_NODE_130957_length_169_cov_1.450000_g129434_i0 PRJNA630162 130957 169 1.45 2.4505 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 80.5 6.47e-11   NTclustered gi|1752345938|ref|XR_004062932.1| 7668 g129434 i0 94.34 37.7869822485207 53 2 31 1 102 154 58 7 PREDICTED: Strongylocentrotus purpuratus U2 spliceosomal RNA (LOC115917722), ncRNA blastn 6386 80.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
22278585 22278585 PRJNA630162_P_NODE_115038_length_177_cov_1.453125_g113515_i0 PRJNA630162 115038 177 1.453125 2.57203125 Leiaster glaber 545793 Echinodermata other_Eukaryota 54.7 0.004   NTclustered gi|525531079|gb|KC512791.1| 545793 g113515 i0 100 0.163841807909605 29 0 16 0 92 120 663 635 Leiaster glaber 18S ribosomal RNA gene, partial sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Ophidiasteridae Leiaster Leiaster glaber
22279389 22279389 PRJNA630162_P_NODE_38678_length_286_cov_12.586498_g37155_i0 PRJNA630162 38678 286 12.586498 35.99738428 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 174 5.41e-39   NTclustered gi|11494220|gb|AF212171.1|AF212171 7668 g37155 i0 91.935 46.8881118881119 124 10 43 0 158 281 2885 2762 Strongylocentrotus purpuratus internal transcribed spacer 2, and 28S ribosomal RNA gene, partial sequence blastn 13410 174 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
24828872 24828872 PRJNA630162_P_NODE_73920_length_209_cov_2.037500_g72397_i0 PRJNA630162 73920 209 2.0375 4.258375 Psychropotes longicauda 55639 Echinodermata other_Eukaryota 71.3 5.06e-8   NTclustered gi|2370359|emb|Z80946.1| 55639 g72397 i0 93.617 15.3684210526316 47 3 22 0 7 53 26 72 P.longicauda partial 28S rRNA gene blastn 3212 71.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Elasipodida Psychropotidae Psychropotes Psychropotes longicauda

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;