contig_metadata
6 rows where analysis = "blastn", bioproject = "PRJNA630162" and tax_phylum = "Chlorobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 601420 | 601420 | PRJNA630162_P_NODE_111501_length_179_cov_1.330769_g109978_i0 | PRJNA630162 | 111501 | 179 | 1.330769 | 2.38207651 | Chlorobiota bacterium | 2268192 | Bacteria | Bacteria | 311 | 2.27e-80 | NTclustered | gi|1958119998|gb|CP065014.1| | 2268192 | g109978 | i0 | 98.851 | 44.3240223463687 | 174 | 2 | 97 | 0 | 6 | 179 | 282340 | 282513 | MAG: Chlorobiota bacterium isolate Ribe_18-Q3-R11-54_MAXAC.096_cln chromosome, complete genome | blastn | 7934 | 311 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiota bacterium | |||||
| 19003048 | 19003048 | PRJNA630162_P_NODE_78175_length_203_cov_3.623377_g76652_i0 | PRJNA630162 | 78175 | 203 | 3.623377 | 7.35545531 | Chlorobium | 1091 | Bacteria | Bacteria | 196 | 7.72e-46 | NTclustered | gi|470481248|ref|NR_076462.1| | 1096 | g76652 | i0 | 85.714 | 19.8177339901478 | 189 | 24 | 93 | 2 | 6 | 193 | 609 | 795 | Chlorobium phaeobacteroides strain DSM 266 23S ribosomal RNA gene, complete sequence | blastn | 4023 | 196 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Chlorobium | Chlorobium phaeobacteroides | |
| 19728778 | 19728778 | PRJNA630162_P_NODE_34036_length_307_cov_4.569767_g32513_i0 | PRJNA630162 | 34036 | 307 | 4.569767 | 14.02918469 | Chlorobiota bacterium | 2268192 | Bacteria | Bacteria | 220 | 7.42e-53 | NTclustered | gi|1958119998|gb|CP065014.1| | 2268192 | g32513 | i0 | 80.583 | 95.3322475570033 | 309 | 40 | 98 | 18 | 1 | 301 | 281550 | 281254 | MAG: Chlorobiota bacterium isolate Ribe_18-Q3-R11-54_MAXAC.096_cln chromosome, complete genome | blastn | 29267 | 220 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiota bacterium | |||||
| 21553534 | 21553534 | PRJNA630162_P_NODE_73877_length_209_cov_2.218750_g72354_i0 | PRJNA630162 | 73877 | 209 | 2.21875 | 4.6371875 | Pelodictyon | 1099 | Bacteria | Bacteria | 148 | 2.27e-31 | NTclustered | gi|470477241|ref|NR_076371.1| | 1100 | g72354 | i0 | 80.488 | 77.4928229665072 | 205 | 30 | 96 | 9 | 7 | 206 | 1486 | 1685 | Pelodictyon luteolum strain DSM 273 23S ribosomal RNA gene, complete sequence | blastn | 16196 | 148 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Pelodictyon | Pelodictyon luteolum | |
| 23554058 | 23554058 | PRJNA630162_P_NODE_119139_length_175_cov_1.301587_g117616_i0 | PRJNA630162 | 119139 | 175 | 1.301587 | 2.27777725 | Chlorobiota bacterium | 2268192 | Bacteria | Bacteria | 211 | 2.3e-50 | NTclustered | gi|1958119998|gb|CP065014.1| | 2268192 | g117616 | i0 | 89.349 | 294.177142857143 | 169 | 16 | 95 | 1 | 1 | 167 | 281910 | 281742 | MAG: Chlorobiota bacterium isolate Ribe_18-Q3-R11-54_MAXAC.096_cln chromosome, complete genome | blastn | 51481 | 211 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiota bacterium | |||||
| 23554528 | 23554528 | PRJNA630162_P_NODE_165379_length_159_cov_2.018182_g163856_i0 | PRJNA630162 | 165379 | 159 | 2.018182 | 3.20890938 | Chlorobiota bacterium | 2268192 | Bacteria | Bacteria | 135 | 1.27e-27 | NTclustered | gi|1958119998|gb|CP065014.1| | 2268192 | g163856 | i0 | 90.476 | 79.2012578616352 | 105 | 6 | 64 | 2 | 5 | 105 | 282812 | 282708 | MAG: Chlorobiota bacterium isolate Ribe_18-Q3-R11-54_MAXAC.096_cln chromosome, complete genome | blastn | 12593 | 135 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;