RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA630162" and tax_phylum = "Candidatus Nealsoniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nealsoniibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA630162 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14631729 14631729 PRJNA630162_P_NODE_89292_length_192_cov_1.979021_g87769_i0 PRJNA630162 89292 192 1.979021 3.79972032 Candidatus Nealsonbacteria bacterium 2093793 Bacteria Bacteria 207 3.33e-49   NTclustered gi|2901418678|gb|CP179888.1| 2093793 g87769 i0 87.363 370.40625 182 21 94 2 6 186 87122 86942 MAG: Candidatus Nealsonbacteria bacterium isolate ER9H13parc1 chromosome, complete genome blastn 71118 207 1 Bacteria Bacteria candidate phyla   Candidatus Nealsoniibacteriota         Candidatus Nealsonbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;