RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA630162" and tax_phylum = "Candidatus Microgenomatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Microgenomatota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA630162 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13905290 13905290 PRJNA630162_P_NODE_19551_length_419_cov_2.940541_g18038_i0 PRJNA630162 19551 419 2.940541 12.32086679 Bacillati 1783272 Bacteria Bacteria 713 0   NTclustered gi|2967783|gb|AF050607.1| 74257 g18038 i0 97.821 86.3961813842482 413 9 99 0 7 419 503 915 Uncultured eubacterium WCHA1-11 16S ribosomal RNA gene, partial sequence blastn 36200 719 0.991655076495132 Bacteria Bacteria candidate phyla   Candidatus Microgenomatota         uncultured eubacterium WCHA1-11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;