RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA630162" and tax_phylum = "Candidatus Fermentibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Fermentibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA630162 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1877524 1877524 PRJNA630162_P_NODE_107762_length_181_cov_1.409091_g106239_i0 PRJNA630162 107762 181 1.409091 2.55045471 Candidatus Fermentibacterota bacterium 2044591 Bacteria Bacteria 163 6.81e-36   NTclustered gi|2874254046|emb|OY970370.1| 2044591 g106239 i0 84.615 110.795580110497 169 21 93 5 6 173 2091434 2091598 MAG: Candidatus Fermentibacteria bacterium isolate MFD00905.bin.1.36 genome assembly, chromosome: 1 blastn 20054 163 1 Bacteria FCB group Pseudomonadati Candidatus Fermentibacterota         Candidatus Fermentibacterota bacterium
19729468 19729468 PRJNA630162_P_NODE_98796_length_186_cov_2.094891_g97273_i0 PRJNA630162 98796 186 2.094891 3.89649726 Candidatus Fermentibacterota bacterium 2044591 Bacteria Bacteria 93.5 9.37e-15   NTclustered gi|2874254046|emb|OY970370.1| 2044591 g97273 i0 86.207 2.88709677419355 87 10 46 2 99 184 2091415 2091500 MAG: Candidatus Fermentibacteria bacterium isolate MFD00905.bin.1.36 genome assembly, chromosome: 1 blastn 537 93.5 1 Bacteria FCB group Pseudomonadati Candidatus Fermentibacterota         Candidatus Fermentibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;