RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA630162" and tax_phylum = "Candidatus Daviesiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Daviesiibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA630162 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4430327 4430327 PRJNA630162_P_NODE_74484_length_208_cov_2.742138_g72961_i0 PRJNA630162 74484 208 2.742138 5.70364704 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 303 4.56e-78   NTclustered gi|1950811978|gb|CP066688.1| 2053542 g72961 i0 95.767 98.4615384615385 189 6 90 2 1 188 498932 498745 MAG: Candidatus Daviesbacteria bacterium isolate NC_groundwater_497_Ag_S-0.1um_39_22 chromosome blastn 20480 303 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;