RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA630162" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA630162 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12081534 12081534 PRJNA630162_P_NODE_27690_length_345_cov_8.756757_g26168_i0 PRJNA630162 27690 345 8.756757 30.21081165 Cyclonatronum proteinivorum 1457365 Bacteria Bacteria 407 6.05e-109   NTclustered gi|1440892538|gb|CP027806.1| 1457365 g26168 i0 88.184 189.130434782609 347 33 99 5 1 344 1021143 1021484 Candidatus Cyclonatronum proteinivorum strain Omega chromosome, complete genome blastn 65250 407 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Cyclonatronaceae Cyclonatronum Cyclonatronum proteinivorum
21003957 21003957 PRJNA630162_P_NODE_12477_length_539_cov_5.271429_g11009_i0 PRJNA630162 12477 539 5.271429 28.41300231 Cyclonatronum proteinivorum 1457365 Bacteria Bacteria 95.3 8.68e-15   NTclustered gi|1440892538|gb|CP027806.1| 1457365 g11009 i0 87.654 0.450834879406308 81 10 15 0 183 263 1020499 1020579 Candidatus Cyclonatronum proteinivorum strain Omega chromosome, complete genome blastn 243 95.3 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Cyclonatronaceae Cyclonatronum Cyclonatronum proteinivorum
21005044 21005044 PRJNA630162_P_NODE_7597_length_695_cov_6.289474_g6320_i0 PRJNA630162 7597 695 6.289474 43.7118443 Balneolaceae bacterium 2053516 Bacteria Bacteria 300 2.24e-76   NTclustered gi|2021937725|gb|CP051242.1| 2053516 g6320 i0 76.349 128.913669064748 630 108 88 35 1 612 1274499 1273893 MAG: Balneolaceae bacterium isolate ih13 chromosome blastn 89595 300 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
23553937 23553937 PRJNA630162_P_NODE_105019_length_182_cov_3.616541_g103496_i0 PRJNA630162 105019 182 3.616541 6.58210462 Cyclonatronum proteinivorum 1457365 Bacteria Bacteria 169 1.4699999999999998e-37   NTclustered gi|1440892538|gb|CP027806.1| 1457365 g103496 i0 84.795 97.956043956044 171 22 93 3 11 179 1023227 1023059 Candidatus Cyclonatronum proteinivorum strain Omega chromosome, complete genome blastn 17828 169 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Cyclonatronaceae Cyclonatronum Cyclonatronum proteinivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;