RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA630162" and tax_phylum = "Acanthocephala"

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tax_superkingdom 1

tax_phylum 1

  • Acanthocephala · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA630162 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5705447 5705447 PRJNA630162_P_NODE_15585_length_476_cov_14.737705_g14089_i0 PRJNA630162 15585 476 14.737705 70.1514758 Transvena annulospinosa 317559 Acanthocephala other_Eukaryota 69.4 4.6e-7   NTclustered gi|1776892085|gb|MN705855.1| 317559 g14089 i0 85.714 0.28781512605042 70 4 14 4 38 104 7 73 Transvena annulospinosa isolate THC19119B large subunit ribosomal RNA gene, partial sequence blastn 137 69.4 1 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala   Transvenidae Transvena Transvena annulospinosa
10806891 10806891 PRJNA630162_P_NODE_82509_length_198_cov_7.114094_g80986_i0 PRJNA630162 82509 198 7.114094 14.08590612 Neoechinorhynchus sp. JYW-2010 911670 Acanthocephala other_Eukaryota 63.9 7.93e-6   NTclustered gi|310768871|gb|HM545899.1| 911670 g80986 i0 81.176 1.05555555555556 85 11 42 3 71 154 173 93 Neoechinorhynchus sp. JYW-2010 28S ribosomal RNA gene, partial sequence blastn 209 63.9 1 Eukaryota Opisthokonta Metazoa Acanthocephala Eoacanthocephala Neoechinorhynchida Neoechinorhynchidae Neoechinorhynchus Neoechinorhynchus sp. JYW-2010
13356719 13356719 PRJNA630162_P_NODE_6451_length_752_cov_9.746799_g5271_i0 PRJNA630162 6451 752 9.746799 73.29592848 Acanthogyrus tylosuri 3151174 Acanthocephala other_Eukaryota 102 7.38e-17   NTclustered gi|1776892065|gb|MN705844.1| 3151174 g5271 i0 80.882 0.422872340425532 136 20 18 4 369 501 328 196 Acanthogyrus tylosuri isolate THC17355 large subunit ribosomal RNA gene, partial sequence blastn 318 102 1 Eukaryota Opisthokonta Metazoa Acanthocephala Eoacanthocephala Gyracanthocephala Quadrigyridae Acanthogyrus Acanthogyrus tylosuri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;