RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA630162" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 2 ✖

bioproject 1

  • PRJNA630162 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19729209 19729209 PRJNA630162_P_NODE_74116_length_209_cov_1.300000_g72593_i0 PRJNA630162 74116 209 1.3 2.717 Inoviridae sp. 2219103 Viruses Viruses 327 2.72e-85   NTclustered gi|2057778617|tpg|BK054669.1| 2219103 g72593 i0 96.465 36.1578947368421 198 7 95 0 7 204 12977 12780 MAG TPA_asm: Inoviridae sp. isolate ct21f1, partial genome blastn 7557 327 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
23554447 23554447 PRJNA630162_P_NODE_158239_length_162_cov_2.849558_g156716_i0 PRJNA630162 158239 162 2.849558 4.61628396 Inoviridae sp. 2219103 Viruses Viruses 110 7.89e-20   NTclustered gi|1436213996|gb|MH617467.1| 2219103 g156716 i0 81.618 7.76543209876543 136 21 83 4 5 138 3553 3686 MAG: Inoviridae sp. isolate ctba17, complete genome blastn 1258 110 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;