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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA630162" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 17 ✖

bioproject 1

  • PRJNA630162 · 17 ✖

analysis 1

  • blastn · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
601741 601741 PRJNA630162_P_NODE_148081_length_165_cov_0.896552_g146558_i0 PRJNA630162 148081 165 0.896552 1.4793108 Methanobrevibacter olleyae 294671 Archaea Archaea 263 5.86e-66   NTclustered gi|998157363|gb|CP014265.1| 294671 g146558 i0 96.296 16.9393939393939 162 3 96 3 2 160 1266619 1266780 Methanobrevibacter olleyae strain YLM1 chromosome, complete genome blastn 2795 263 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter olleyae
1877626 1877626 PRJNA630162_P_NODE_118242_length_175_cov_2.039683_g116719_i0 PRJNA630162 118242 175 2.039683 3.56944525 Methanobacterium sp. ERen5 2977359 Archaea Archaea 62.1 2.45e-5   NTclustered gi|2264313079|gb|CP099988.1| 2977359 g116719 i0 97.297 0.8 37 0 21 1 92 127 780681 780717 MAG: Methanobacterium sp. ERen5 chromosome, complete genome blastn 140 62.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp. ERen5
3152938 3152938 PRJNA630162_P_NODE_18063_length_438_cov_4.095116_g16555_i0 PRJNA630162 18063 438 4.095116 17.93660808 Methanobacterium alkalithermotolerans 2731220 Archaea Archaea 446 1.66e-120   NTclustered gi|2029999282|gb|CP058560.1| 2731220 g16555 i0 85.275 120.563926940639 455 42 99 16 6 438 1650655 1651106 Methanobacterium alkalithermotolerans strain CAN chromosome, complete genome blastn 52807 446 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium alkalithermotolerans
5705037 5705037 PRJNA630162_P_NODE_111305_length_179_cov_1.446154_g109782_i0 PRJNA630162 111305 179 1.446154 2.58861566 Methanobrevibacter millerae 230361 Archaea Archaea 171 4.01e-38   NTclustered gi|968564921|gb|CP011266.1| 230361 g109782 i0 85.119 0.93854748603352 168 23 93 2 10 176 2004217 2004051 Methanobrevibacter millerae strain SM9, complete genome blastn 168 171 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter millerae
8804243 8804243 PRJNA630162_P_NODE_169387_length_155_cov_2.311321_g167864_i0 PRJNA630162 169387 155 2.311321 3.58254755 root 1 Root_unresolved Root_unresolved 213 5.52e-51   NTclustered gi|1294447101|gb|CP017803.1| 2173 g167864 i0 93.151 91.2516129032258 146 8 94 2 3 148 459601 459458 Methanobrevibacter smithii strain KB11 chromosome, complete genome blastn 14144 215 0.990697674418605 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
10079599 10079599 PRJNA630162_P_NODE_109468_length_180_cov_1.473282_g107945_i0 PRJNA630162 109468 180 1.473282 2.6519076 Methanobacterium 2160 Archaea Archaea 291 2.9699999999999998e-74   NTclustered gi|584298062|gb|KF882001.1| 2171 g107945 i0 96.571 112.772222222222 175 6 97 0 1 175 952 778 Methanobacterium palustre strain F 23S ribosomal RNA gene, partial sequence blastn 20299 291 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium palustre
10080029 10080029 PRJNA630162_P_NODE_69488_length_213_cov_1.268293_g67965_i0 PRJNA630162 69488 213 1.268293 2.70146409 Methanobrevibacter 2172 Archaea Archaea 303 4.69e-78   NTclustered gi|968564921|gb|CP011266.1| 230361 g67965 i0 93.301 37.0610328638498 209 9 97 5 1 207 541559 541354 Methanobrevibacter millerae strain SM9, complete genome blastn 7894 303 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter millerae
13905472 13905472 PRJNA630162_P_NODE_63191_length_222_cov_2.936416_g61668_i0 PRJNA630162 63191 222 2.936416 6.51884352 Methanobacteriaceae 2159 Archaea Archaea 52.8 0.02   NTclustered gi|2047640843|dbj|AP019779.1| 39441 g61668 i0 96.875 0.576576576576577 32 0 14 1 62 92 939319 939350 Methanobrevibacter arboriphilus SA DNA, complete genome blastn 128 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
14631427 14631427 PRJNA630162_P_NODE_62192_length_224_cov_2.268571_g60669_i0 PRJNA630162 62192 224 2.268571 5.08159904 uncultured Methanobacteriaceae archaeon 176233 Archaea Archaea 350 6.300000000000001e-92   NTclustered gi|2874253877|emb|OY969932.1| 176233 g60669 i0 95.853 46.5669642857143 217 8 97 1 1 217 29427 29642 MAG: uncultured Methanobacteriaceae archaeon isolate MFD09286.bin.c.5 genome assembly, chromosome: 1 blastn 10431 350 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   uncultured Methanobacteriaceae archaeon
15179741 15179741 PRJNA630162_P_NODE_21692_length_395_cov_2.968208_g20174_i0 PRJNA630162 21692 395 2.968208 11.7244216 Methanobrevibacter 2172 Archaea Archaea 713 0   NTclustered gi|5725307|emb|AJ009958.1| 66852 g20174 i0 99.744 107.787341772152 390 0 98 1 1 389 1406 1017 Methanobrevibacter sp. SM9 16S rRNA gene, partial blastn 42576 713 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
15179785 15179785 PRJNA630162_P_NODE_29672_length_332_cov_3.731449_g28150_i0 PRJNA630162 29672 332 3.731449 12.38841068 root 1 Root_unresolved Root_unresolved 407 5.789999999999999e-109   NTclustered gi|2165124678|dbj|LC664176.1| 2164 g28150 i0 100 103.596385542169 220 0 100 0 113 332 1196 977 Methanobacterium sp. TO1 gene for 16S rRNA, partial sequence blastn 34394 407 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
15905054 15905054 PRJNA630162_P_NODE_3013_length_1068_cov_3.209028_g2273_i0 PRJNA630162 3013 1068 3.209028 34.27241904 Methanobacterium alcaliphilum 392018 Archaea Archaea 1554 0   NTclustered gi|584298067|gb|KF882006.1| 392018 g2273 i0 93.045 158.035580524345 1064 72 99 2 3 1064 1746 683 Methanobacterium alcaliphilum strain WeN4 23S ribosomal RNA gene, partial sequence blastn 168782 1554 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium alcaliphilum
18453478 18453478 PRJNA630162_P_NODE_11795_length_556_cov_2.477318_g10338_i0 PRJNA630162 11795 556 2.477318 13.77388808 Methanobacterium alcaliphilum 392018 Archaea Archaea 907 0   NTclustered gi|584298067|gb|KF882006.1| 392018 g10338 i0 96.37 176.519784172662 551 20 99 0 6 556 1932 2482 Methanobacterium alcaliphilum strain WeN4 23S ribosomal RNA gene, partial sequence blastn 98145 907 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium alcaliphilum
19727998 19727998 PRJNA630162_P_NODE_110596_length_179_cov_2.292308_g109073_i0 PRJNA630162 110596 179 2.292308 4.10323132 Methanobacterium aridiramus 2584467 Archaea Archaea 300 4.9e-77   NTclustered gi|2523005876|gb|CP040735.1| 2584467 g109073 i0 97.701 50.7486033519553 174 4 97 0 6 179 1373410 1373583 Methanobacterium aridiramus strain CWC-01 chromosome, complete genome blastn 9084 300 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium aridiramus
19729307 19729307 PRJNA630162_P_NODE_83716_length_197_cov_3.108108_g82193_i0 PRJNA630162 83716 197 3.108108 6.12297276 uncultured Methanobacteriaceae archaeon 176233 Archaea Archaea 318 1.52e-82   NTclustered gi|2874253877|emb|OY969932.1| 176233 g82193 i0 96.373 140.507614213198 193 7 98 0 1 193 28139 28331 MAG: uncultured Methanobacteriaceae archaeon isolate MFD09286.bin.c.5 genome assembly, chromosome: 1 blastn 27680 318 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   uncultured Methanobacteriaceae archaeon
22828688 22828688 PRJNA630162_P_NODE_16198_length_466_cov_4.484412_g14700_i0 PRJNA630162 16198 466 4.484412 20.89735992 root 1 Root_unresolved Root_unresolved 822 0   NTclustered gi|2230636480|gb|ON341022.1| 2164 g14700 i0 98.498 106.961373390558 466 7 100 0 1 466 907 442 Methanobacterium sp. strain ERen54 16S ribosomal RNA gene, partial sequence blastn 49844 828 0.992753623188406 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
25378034 25378034 PRJNA630162_P_NODE_84760_length_196_cov_2.612245_g83237_i0 PRJNA630162 84760 196 2.612245 5.1200002 Methanobacteriota 28890 Archaea Archaea 71.3 4.68e-8   NTclustered gi|507148390|ref|NR_103193.1| 2180 g83237 i0 93.617 2.02551020408163 47 3 24 0 73 119 1176 1222 Methanothermus fervidus strain DSM 2088 23S ribosomal RNA gene, complete sequence blastn 397 71.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanothermaceae Methanothermus Methanothermus fervidus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;