RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA630162" and tax_clade = "Candidatus Thermofonsia Clade 3"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Thermofonsia Clade 3 · 6 ✖

bioproject 1

  • PRJNA630162 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
601757 601757 PRJNA630162_P_NODE_150061_length_164_cov_2.147826_g148538_i0 PRJNA630162 150061 164 2.147826 3.52243464 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 169 1.3000000000000001e-37   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g148538 i0 86.624 6.1890243902439 157 16 95 4 2 156 3495882 3495729 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 1015 169 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
4429396 4429396 PRJNA630162_P_NODE_1444_length_1440_cov_19.718188_g740_i1 PRJNA630162 1444 1440 19.718188 283.9419072 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 902 0   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g740 i1 83.795 151.234722222222 975 132 90 21 126 1089 3495400 3496359 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 217778 902 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
5705415 5705415 PRJNA630162_P_NODE_1525_length_1410_cov_20.432035_g740_i2 PRJNA630162 1525 1410 20.432035 288.0916935 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 902 0   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g740 i2 83.795 189.372340425532 975 132 91 21 126 1089 3495400 3496359 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 267015 902 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
15905484 15905484 PRJNA630162_P_NODE_7513_length_699_cov_13.544615_g6240_i0 PRJNA630162 7513 699 13.544615 94.67685885 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 553 1.5699999999999996e-152   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g6240 i0 82.326 126.636623748212 645 106 91 7 1 639 3495230 3494588 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 88519 553 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
17180426 17180426 PRJNA630162_P_NODE_55074_length_237_cov_5.345745_g53551_i0 PRJNA630162 55074 237 5.345745 12.66941565 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 178 3.3599999999999998e-40   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g53551 i0 82.353 106.42194092827 204 36 86 0 7 210 3497758 3497961 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 25222 178 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
18454693 18454693 PRJNA630162_P_NODE_76535_length_205_cov_8.416667_g75012_i0 PRJNA630162 76535 205 8.416667 17.25416735 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 259 9.83e-65   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g75012 i0 89.706 353.868292682927 204 20 99 1 1 204 3497531 3497329 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 72543 259 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;