RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA627467" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA627467 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9527556 9527556 PRJNA627467_P_NODE_16628_length_166_cov_2.495726_g16559_i0 PRJNA627467 16628 166 2.495726 4.14290516 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 182 1.7e-41   NTclustered gi|2874254066|emb|OY970149.1| 1672391 g16559 i0 86.957 1.93975903614458 161 21 97 0 6 166 523504 523344 MAG: uncultured Chloroflexia bacterium isolate MFD05747.bin.c.2 genome assembly, chromosome: 1 blastn 322 182 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
10079393 10079393 PRJNA627467_P_NODE_5528_length_316_cov_1.539326_g5460_i0 PRJNA627467 5528 316 1.539326 4.86427016 Bacteria 2 Bacteria Bacteria 135 2.86e-27   NTclustered gi|297181775|gb|GU474878.1| 710736 g5460 i0 92.632 44.8037974683544 95 6 30 1 217 310 9308 9214 Uncultured Chloroflexi bacterium HF0200_09I09 genomic sequence blastn 14158 135 1 Bacteria   Bacillati Chloroflexota         uncultured Chloroflexi bacterium HF0200_09I09
12078462 12078462 PRJNA627467_P_NODE_10010_length_188_cov_1.136691_g9941_i0 PRJNA627467 10010 188 1.136691 2.13697908 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 56.5 0.001   NTclustered gi|2621713652|emb|OY771913.1| 2024896 g9941 i0 94.595 0.393617021276596 37 0 20 1 5 41 1891097 1891131 MAG: Anaerolineaceae bacterium isolate c74f872c-e933-4053-8305-e1536b6d7914 genome assembly, chromosome: 1 blastn 74 56.5 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
17177088 17177088 PRJNA627467_P_NODE_15794_length_168_cov_2.436975_g15725_i0 PRJNA627467 15794 168 2.436975 4.094118 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 143 8.139999999999998e-30   NTclustered gi|2874253981|emb|OY970306.1| 1672391 g15725 i0 95.506 40.4285714285714 89 4 53 0 80 168 2760394 2760482 MAG: uncultured Chloroflexia bacterium isolate MFD02134.bin.c.1 genome assembly, chromosome: 1 blastn 6792 143 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
21001508 21001508 PRJNA627467_P_NODE_16457_length_167_cov_0.864407_g16388_i0 PRJNA627467 16457 167 0.864407 1.44355969 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 250 4.63e-62   NTclustered gi|2874254102|emb|OY970185.1| 1672391 g16388 i0 94.444 48.9760479041916 162 9 97 0 4 165 2477024 2476863 MAG: uncultured Chloroflexia bacterium isolate MFD06435.bin.c.3 genome assembly, chromosome: 1 blastn 8179 250 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
22276303 22276303 PRJNA627467_P_NODE_18698_length_162_cov_1.769912_g18629_i0 PRJNA627467 18698 162 1.769912 2.86725744 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 235 1.25e-57   NTclustered gi|2874254132|emb|OY970217.1| 1672391 g18629 i0 93.631 507.191358024691 157 10 97 0 5 161 3523321 3523477 MAG: uncultured Chloroflexia bacterium isolate MFD05684.bin.1.130 genome assembly, chromosome: 1 blastn 82165 235 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;