contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA627467" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1150734 | 1150734 | PRJNA627467_P_NODE_11881_length_181_cov_2.590909_g11812_i0 | PRJNA627467 | 11881 | 181 | 2.590909 | 4.68954529 | Deinococcus | 1298 | Bacteria | Bacteria | 322 | 1.06e-83 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g11812 | i0 | 99.435 | 192.845303867403 | 177 | 1 | 98 | 0 | 1 | 177 | 1636185 | 1636361 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 34905 | 322 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 4426829 | 4426829 | PRJNA627467_P_NODE_19864_length_159_cov_2.527273_g19795_i0 | PRJNA627467 | 19864 | 159 | 2.527273 | 4.01836407 | Deinococcus sonorensis | 309891 | Bacteria | Bacteria | 76.8 | 7.81e-10 | NTclustered | gi|2745307249|gb|CP158299.1| | 694439 | g19795 | i0 | 97.727 | 0.830188679245283 | 44 | 1 | 28 | 0 | 4 | 47 | 336817 | 336774 | Deinococcus sonorensis KR-87 chromosome, complete genome | blastn | 132 | 76.8 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sonorensis | ||
| 4979020 | 4979020 | PRJNA627467_P_NODE_20044_length_158_cov_2.972477_g19975_i0 | PRJNA627467 | 20044 | 158 | 2.972477 | 4.69651366 | Thermus | 270 | Bacteria | Bacteria | 285 | 1.18e-72 | NTclustered | gi|383508497|gb|CP003252.1| | 798128 | g19975 | i0 | 100 | 44.0949367088608 | 154 | 0 | 97 | 0 | 4 | 157 | 175834 | 175987 | Thermus thermophilus JL-18, complete genome | blastn | 6967 | 285 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 5702847 | 5702847 | PRJNA627467_P_NODE_425_length_494_cov_3.633708_g360_i0 | PRJNA627467 | 425 | 494 | 3.633708 | 17.95051752 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 527 | 6.569999999999999e-145 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g360 | i0 | 98.98 | 200.334008097166 | 294 | 3 | 94 | 0 | 3 | 296 | 545056 | 545349 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 98965 | 527 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 6977646 | 6977646 | PRJNA627467_P_NODE_19526_length_160_cov_4.396396_g19457_i0 | PRJNA627467 | 19526 | 160 | 4.396396 | 7.0342336 | Deinococcus aetherius | 200252 | Bacteria | Bacteria | 148 | 1.6499999999999995e-31 | NTclustered | gi|2281894955|dbj|AP026560.1| | 200252 | g19457 | i0 | 83.974 | 193.875 | 156 | 24 | 98 | 1 | 1 | 156 | 81838 | 81684 | Deinococcus aetherius ST0316 DNA, complete genome | blastn | 31020 | 148 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aetherius | ||
| 8252293 | 8252293 | PRJNA627467_P_NODE_14387_length_173_cov_1.387097_g14318_i0 | PRJNA627467 | 14387 | 173 | 1.387097 | 2.39967781 | Thermus scotoductus | 37636 | Bacteria | Bacteria | 309 | 7.81e-80 | NTclustered | gi|320149275|gb|CP001962.1| | 743525 | g14318 | i0 | 99.412 | 4.91329479768786 | 170 | 1 | 98 | 0 | 1 | 170 | 1146632 | 1146463 | Thermus scotoductus SA-01, complete genome | blastn | 850 | 309 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus scotoductus | ||
| 10079378 | 10079378 | PRJNA627467_P_NODE_4508_length_316_cov_1.734082_g4440_i0 | PRJNA627467 | 4508 | 316 | 1.734082 | 5.47969912 | Deinococcus | 1298 | Bacteria | Bacteria | 169 | 2.8199999999999997e-37 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g4440 | i0 | 97 | 55.8639240506329 | 100 | 3 | 32 | 0 | 1 | 100 | 423298 | 423199 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 17653 | 169 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 11354235 | 11354235 | PRJNA627467_P_NODE_2409_length_316_cov_2.651685_g2341_i0 | PRJNA627467 | 2409 | 316 | 2.651685 | 8.3793246 | FCB group | 1783270 | Bacteria | Bacteria | 182 | 3.62e-41 | NTclustered | gi|2444209308|gb|KU060869.2| | 47478 | g2341 | i0 | 100 | 33.9113924050633 | 98 | 0 | 31 | 0 | 216 | 313 | 418 | 321 | Deinococcus sp. strain UYEF24 16S ribosomal RNA gene, partial sequence | blastn | 10716 | 183 | 0.994535519125683 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 13904707 | 13904707 | PRJNA627467_P_NODE_14831_length_171_cov_3.106557_g14762_i0 | PRJNA627467 | 14831 | 171 | 3.106557 | 5.31221247 | Thermus | 270 | Bacteria | Bacteria | 305 | 9.96e-79 | NTclustered | gi|470468782|ref|NR_076136.1| | 37636 | g14762 | i0 | 99.405 | 146.087719298246 | 168 | 1 | 98 | 0 | 1 | 168 | 2229 | 2062 | Thermus scotoductus strain SA-01 23S ribosomal RNA gene, complete sequence | blastn | 24981 | 305 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus scotoductus | ||
| 16453579 | 16453579 | PRJNA627467_P_NODE_18493_length_162_cov_4.442478_g18424_i0 | PRJNA627467 | 18493 | 162 | 4.442478 | 7.19681436 | Deinococcus | 1298 | Bacteria | Bacteria | 239 | 9.64e-59 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g18424 | i0 | 93.75 | 205.660493827161 | 160 | 8 | 98 | 2 | 4 | 162 | 1791961 | 1791803 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 33317 | 241 | 0.991701244813278 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 18451172 | 18451172 | PRJNA627467_P_NODE_13075_length_177_cov_2.414062_g13006_i0 | PRJNA627467 | 13075 | 177 | 2.414062 | 4.27288974 | Deinococcus aquaticus | 328692 | Bacteria | Bacteria | 196 | 6.53e-46 | NTclustered | gi|2444120906|gb|CP115165.1| | 328692 | g13006 | i0 | 89.172 | 1.07909604519774 | 157 | 17 | 89 | 0 | 16 | 172 | 2489229 | 2489073 | Deinococcus aquaticus strain PB-314 chromosome, complete genome | blastn | 191 | 196 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aquaticus | ||
| 20277262 | 20277262 | PRJNA627467_P_NODE_19896_length_159_cov_2.336364_g19827_i0 | PRJNA627467 | 19896 | 159 | 2.336364 | 3.71481876 | Thermus | 270 | Bacteria | Bacteria | 289 | 9.22e-74 | NTclustered | gi|320151725|gb|CP001963.1| | 743525 | g19827 | i0 | 99.371 | 50.0062893081761 | 159 | 1 | 100 | 0 | 1 | 159 | 7573 | 7731 | Thermus scotoductus SA-01 plasmid pTSC8, complete sequence | blastn | 7951 | 289 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus scotoductus | ||
| 22276309 | 22276309 | PRJNA627467_P_NODE_19818_length_159_cov_3.018182_g19749_i0 | PRJNA627467 | 19818 | 159 | 3.018182 | 4.79890938 | Thermus thermophilus | 274 | Bacteria | Bacteria | 292 | 7.13e-75 | NTclustered | gi|1519241055|emb|LR027520.1| | 274 | g19749 | i0 | 100 | 2.9811320754717 | 158 | 0 | 99 | 0 | 2 | 159 | 28278 | 28435 | Thermus thermophilus isolate TTHNAR1 genome assembly, plasmid: 4 | blastn | 474 | 292 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 23551838 | 23551838 | PRJNA627467_P_NODE_8539_length_204_cov_1.541935_g8470_i0 | PRJNA627467 | 8539 | 204 | 1.541935 | 3.1455474 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 255 | 1.26e-63 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g8470 | i0 | 91.005 | 5.97549019607843 | 189 | 17 | 93 | 0 | 16 | 204 | 69809 | 69621 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 1219 | 255 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 23551841 | 23551841 | PRJNA627467_P_NODE_8799_length_197_cov_5.358108_g8730_i0 | PRJNA627467 | 8799 | 197 | 5.358108 | 10.55547276 | Deinococcus aetherius | 200252 | Bacteria | Bacteria | 303 | 4.27e-78 | NTclustered | gi|2281894955|dbj|AP026560.1| | 200252 | g8730 | i0 | 95.745 | 195.51269035533 | 188 | 8 | 95 | 0 | 5 | 192 | 83595 | 83782 | Deinococcus aetherius ST0316 DNA, complete genome | blastn | 38516 | 303 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aetherius | ||
| 24825335 | 24825335 | PRJNA627467_P_NODE_17900_length_164_cov_0.886957_g17831_i0 | PRJNA627467 | 17900 | 164 | 0.886957 | 1.45460948 | Thermus sp. NEB1569 | 2918899 | Bacteria | Bacteria | 289 | 9.59e-74 | NTclustered | gi|2199052145|gb|CP092445.1| | 2918899 | g17831 | i0 | 99.371 | 5.96341463414634 | 159 | 1 | 97 | 0 | 3 | 161 | 322505 | 322347 | Thermus sp. NEB1569 chromosome, complete genome | blastn | 978 | 289 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus sp. NEB1569 | ||
| 24825432 | 24825432 | PRJNA627467_P_NODE_6640_length_273_cov_3.946429_g6571_i0 | PRJNA627467 | 6640 | 273 | 3.946429 | 10.77375117 | Deinococcus soli (ex Cha et al. 2016) | 1309411 | Bacteria | Bacteria | 492 | 1.2499999999999996e-134 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g6571 | i0 | 99.267 | 201.915750915751 | 273 | 1 | 100 | 1 | 1 | 273 | 1638229 | 1638500 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 55123 | 492 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 25377356 | 25377356 | PRJNA627467_P_NODE_8180_length_212_cov_4.067485_g8111_i0 | PRJNA627467 | 8180 | 212 | 4.067485 | 8.6230682 | Deinococcus | 1298 | Bacteria | Bacteria | 339 | 1.28e-88 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g8111 | i0 | 97.475 | 189.372641509434 | 198 | 5 | 94 | 0 | 14 | 211 | 423521 | 423718 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 40147 | 339 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;