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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA627467" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 13 ✖

bioproject 1

  • PRJNA627467 · 13 ✖

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2425912 2425912 PRJNA627467_P_NODE_13102_length_177_cov_2.140625_g13033_i0 PRJNA627467 13102 177 2.140625 3.78890625 Balticola 1328802 Plants Plants 207 3.02e-49   NTclustered gi|6120015|gb|AF183475.1| 51690 g13033 i0 88.136 6.7909604519774 177 18 99 3 2 177 1699 1525 Balticola zimbabwiensis strain UTEX LB 1758 28S ribosomal RNA gene, partial sequence blastn 1202 207 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Balticola Balticola zimbabwiensis
3150154 3150154 PRJNA627467_P_NODE_7943_length_219_cov_1.964706_g7874_i0 PRJNA627467 7943 219 1.964706 4.30270614 Dicloster acuatus 91190 Plants Plants 337 4.78e-88   NTclustered gi|725651324|ref|NC_025546.1| 91190 g7874 i0 94.907 137.840182648402 216 10 98 1 2 216 98668 98453 Dicloster acuatus culture-collection SAG:41.98 chloroplast, complete genome blastn 30187 337 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dicloster Dicloster acuatus
4426874 4426874 PRJNA627467_P_NODE_3904_length_316_cov_1.898876_g3836_i0 PRJNA627467 3904 316 1.898876 6.00044816 Chlamydomonas reinhardtii 3055 Plants Plants 54.7 0.008   NTclustered gi|2082243229|ref|XM_043061197.1| 3055 g3836 i0 94.286 0.110759493670886 35 2 11 0 31 65 9721 9687 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_03g192300v5), mRNA blastn 35 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
4426903 4426903 PRJNA627467_P_NODE_6344_length_298_cov_2.216867_g6276_i0 PRJNA627467 6344 298 2.216867 6.60626366 Chloroidium ellipsoideum 63676 Plants Plants 433 8.47e-117   NTclustered gi|1169296931|gb|KY364701.1| 63676 g6276 i0 93.243 6.46308724832215 296 16 99 4 2 295 5761 5468 Chloroidium ellipsoideum 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 1926 433 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium ellipsoideum
4979070 4979070 PRJNA627467_P_NODE_384_length_512_cov_6.654428_g322_i0 PRJNA627467 384 512 6.654428 34.07067136 Trebouxiophyceae 75966 Plants Plants 739 0   NTclustered gi|1169296931|gb|KY364701.1| 63676 g322 i0 93.097 99.392578125 507 31 98 3 3 506 4279 3774 Chloroidium ellipsoideum 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 50889 743 0.994616419919246 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium ellipsoideum
14628197 14628197 PRJNA627467_P_NODE_7812_length_222_cov_3.502890_g7743_i0 PRJNA627467 7812 222 3.50289 7.7764158 Oltmannsiellopsis sp. CCMP1240 1108793 Plants Plants 272 1.3899999999999999e-68   NTclustered gi|371782088|emb|HE610120.1| 1108793 g7743 i0 89.091 99.1171171171171 220 22 98 2 3 220 4180 3961 Oltmannsiellopsis sp. CCMP1240 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain CCMP1240 blastn 22004 272 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Oltmannsiellopsidales Oltmannsiellopsidaceae Oltmannsiellopsis Oltmannsiellopsis sp. CCMP1240
15902063 15902063 PRJNA627467_P_NODE_12713_length_178_cov_3.511628_g12644_i0 PRJNA627467 12713 178 3.511628 6.25069784 Auxenochlorella protothecoides 3075 Plants Plants 97.1 6.86e-16   NTclustered gi|760448014|ref|XM_011402774.1| 3075 g12644 i0 76.966 1 178 35 98 5 3 177 240 414 Auxenochlorella protothecoides Acyl-[acyl-carrier-protein] desaturase 5, chloroplastic partial mRNA blastn 178 97.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
15902110 15902110 PRJNA627467_P_NODE_16933_length_166_cov_0.871795_g16864_i0 PRJNA627467 16933 166 0.871795 1.4471797 Lobosphaera incisa 312850 Plants Plants 137 3.73e-28   NTclustered gi|821316988|ref|NC_027060.1| 312850 g16864 i0 91.262 15.2771084337349 103 5 60 3 64 163 29026 28925 Lobosphaera incisa strain SAG 2468 mitochondrion, complete genome blastn 2536 137 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Lobosphaera Lobosphaera incisa
16453505 16453505 PRJNA627467_P_NODE_1453_length_325_cov_11.554348_g1386_i0 PRJNA627467 1453 325 11.554348 37.551631 Eukaryota 2759 Plants Plants 592 1.4599999999999996e-164   NTclustered gi|1714003650|gb|MN243923.1| 3079 g1386 i0 100 97.6523076923077 320 0 98 0 4 323 567 886 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 31737 592 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
16453525 16453525 PRJNA627467_P_NODE_15473_length_169_cov_2.750000_g15404_i0 PRJNA627467 15473 169 2.75 4.6475 Chlorophyta 3041 Plants Plants 292 7.64e-75   NTclustered gi|2528847353|gb|OR211494.1| 3076 g15404 i0 98.78 97.0414201183432 164 2 97 0 3 166 777 614 Chlorella sorokiniana isolate M18 small subunit ribosomal RNA gene, partial sequence blastn 16400 292 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
22828382 22828382 PRJNA627467_P_NODE_8298_length_209_cov_5.456250_g8229_i0 PRJNA627467 8298 209 5.45625 11.4035625 Eukaryota 2759 Plants Plants 374 3.4399999999999996e-99   NTclustered gi|1714003650|gb|MN243923.1| 3079 g8229 i0 100 96.4497607655502 202 0 97 0 5 206 256 55 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 20158 374 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
23551785 23551785 PRJNA627467_P_NODE_319_length_556_cov_8.737673_g257_i0 PRJNA627467 319 556 8.737673 48.58146188 Parachlorella kessleri 3074 Plants Plants 933 0   NTclustered gi|254798615|ref|NC_012978.1| 3074 g257 i0 96.942 118.773381294964 556 17 100 0 1 556 94451 93896 Parachlorella kessleri chloroplast, complete genome blastn 66038 933 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Parachlorella Parachlorella kessleri
25377169 25377169 PRJNA627467_P_NODE_19020_length_161_cov_3.705357_g18951_i0 PRJNA627467 19020 161 3.705357 5.96562477 root 1 Root_unresolved Root_unresolved 257 2.64e-64   NTclustered gi|77627727|dbj|AB237642.1| 3077 g18951 i0 96.753 101.900621118012 154 5 96 0 5 158 2528 2375 Chlorella vulgaris NIES:227 gene for 28S ribosomal RNA, partial sequence blastn 16406 259 0.992277992277992 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;