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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA627467" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 17 ✖

bioproject 1

  • PRJNA627467 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
599168 599168 PRJNA627467_P_NODE_20701_length_155_cov_3.452830_g20632_i0 PRJNA627467 20701 155 3.45283 5.3518865 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 278 1.93e-70   NTclustered gi|238617602|gb|FJ973377.1| 188950 g20632 i0 99.351 0.993548387096774 154 0 99 1 3 155 554 401 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 154 278 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
3149975 3149975 PRJNA627467_P_NODE_11883_length_181_cov_2.545455_g11814_i0 PRJNA627467 11883 181 2.545455 4.60727355 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 200 5.19e-47   NTclustered gi|2651357791|gb|PP174306.1| 41631 g11814 i0 87.079 32.0773480662983 178 21 98 2 4 181 3687 3862 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 5806 200 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
3149996 3149996 PRJNA627467_P_NODE_13183_length_177_cov_1.562500_g13114_i0 PRJNA627467 13183 177 1.5625 2.765625 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 113 6.7600000000000005e-21   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g13114 i0 83.077 22.7401129943503 130 16 73 5 5 134 3793 3916 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 4025 113 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
3150083 3150083 PRJNA627467_P_NODE_19663_length_160_cov_2.423423_g19594_i0 PRJNA627467 19663 160 2.423423 3.8774768 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 224 2.6599999999999995e-54   NTclustered gi|1624698154|ref|XM_029013945.1| 189622 g19594 i0 92.5 24.375 160 6 98 2 1 156 72 229 Babesia ovata vWA domain-like family protein, putative (BOVATA_050280), partial mRNA blastn 3900 224 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
3702416 3702416 PRJNA627467_P_NODE_17643_length_164_cov_2.365217_g17574_i0 PRJNA627467 17643 164 2.365217 3.87895588 Poterioochromonas 88166 SAR_Eukaryotes SAR_Eukaryotes 298 1.59e-76   NTclustered gi|323690576|gb|GU935635.1| 88167 g17574 i0 100 53.219512195122 161 0 98 0 1 161 1650 1490 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 8728 298 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
4426830 4426830 PRJNA627467_P_NODE_19904_length_159_cov_2.300000_g19835_i0 PRJNA627467 19904 159 2.3 3.657 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 268 1.1999999999999998e-67   NTclustered gi|323690576|gb|GU935635.1| 88167 g19835 i0 97.468 35.1635220125786 158 2 98 2 1 156 1966 1809 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 5591 268 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
6977543 6977543 PRJNA627467_P_NODE_10146_length_187_cov_2.369565_g10077_i0 PRJNA627467 10146 187 2.369565 4.43108655 Thaumatomonas sp. TMT002 407209 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.001   NTclustered gi|116222178|gb|DQ980465.1| 407209 g10077 i0 100 0.160427807486631 30 0 16 0 154 183 681 652 Thaumatomonas sp. TMT002 Hsp90 mRNA, partial cds blastn 30 56.5 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas sp. TMT002
6977664 6977664 PRJNA627467_P_NODE_21226_length_153_cov_2.721154_g21157_i0 PRJNA627467 21226 153 2.721154 4.16336562 Colponema vietnamica 1492817 SAR_Eukaryotes SAR_Eukaryotes 143 7.23e-30   NTclustered gi|1280963088|gb|MG202006.1| 1492817 g21157 i0 84.211 100.281045751634 152 19 97 5 5 153 11107 11256 Colponema vietnamica strain Colp-7a mitochondrion blastn 15343 143 1 Eukaryota Sar       Colponemida Colponemidia Colponema Colponema vietnamica
8252255 8252255 PRJNA627467_P_NODE_1127_length_350_cov_2.109635_g1060_i0 PRJNA627467 1127 350 2.109635 7.3837225 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 198 4.01e-46   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g1060 i0 97.414 12.98 116 3 50 0 232 347 3820 3705 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 4543 198 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
9527688 9527688 PRJNA627467_P_NODE_8988_length_194_cov_1.565517_g8919_i0 PRJNA627467 8988 194 1.565517 3.03710298 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 346 6.860000000000001e-91   NTclustered gi|325194239|emb|FR825095.1| 890382 g8919 i0 99.474 97.860824742268 190 1 98 0 5 194 1438 1249 Albugo laibachii Nc14, genomic contig CONTIG_1625_NC14_v4_1818_619 blastn 18985 346 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
10079350 10079350 PRJNA627467_P_NODE_2848_length_316_cov_2.329588_g2780_i0 PRJNA627467 2848 316 2.329588 7.36149808 root 1 Root_unresolved Root_unresolved 180 1.3e-40   NTclustered gi|194476495|ref|NC_011087.1| 39717 g2780 i0 99 102.072784810127 100 1 62 0 217 316 307535 307436 Paulinella chromatophora chromatophore, complete genome blastn 32255 180 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
12078518 12078518 PRJNA627467_P_NODE_15050_length_171_cov_1.090164_g14981_i0 PRJNA627467 15050 171 1.090164 1.86418044 Cylindrotheca closterium 2856 SAR_Eukaryotes SAR_Eukaryotes 239 1.02e-58   NTclustered gi|2862228858|gb|PQ645492.1| 2856 g14981 i0 92.308 98.906432748538 169 11 98 2 1 167 3479 3647 Cylindrotheca closterium isolate AGSB0341 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 16913 239 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium
16453552 16453552 PRJNA627467_P_NODE_17133_length_165_cov_2.405172_g17064_i0 PRJNA627467 17133 165 2.405172 3.9685338 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 215 1.66e-51   NTclustered gi|16326553|gb|AF409121.1| 64707 g17064 i0 91.667 66.0121212121212 156 12 94 1 7 161 3831 3676 Chrysolepidomonas dendrolepidota internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 10892 215 1 Eukaryota Sar     Chrysophyceae Chromulinales Chrysolepidomonadaceae Chrysolepidomonas Chrysolepidomonas dendrolepidota
17177043 17177043 PRJNA627467_P_NODE_12294_length_180_cov_1.526718_g12225_i0 PRJNA627467 12294 180 1.526718 2.7480924 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 320 3.79e-83   NTclustered gi|323690576|gb|GU935635.1| 88167 g12225 i0 99.432 64.7111111111111 176 1 98 0 1 176 2500 2325 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 11648 320 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
17728732 17728732 PRJNA627467_P_NODE_4434_length_316_cov_1.749064_g4366_i0 PRJNA627467 4434 316 1.749064 5.52704224 Poteriospumella 1117026 SAR_Eukaryotes SAR_Eukaryotes 180 1.3e-40   NTclustered gi|2295553597|gb|OP378946.1| 1117027 g4366 i0 99.01 29.1392405063291 101 0 62 1 1 100 18 118 Poteriospumella lacustris isolate 1532 large subunit ribosomal RNA gene, partial sequence blastn 9208 180 1 Eukaryota Sar     Chrysophyceae Chromulinales Dinobryaceae Poteriospumella Poteriospumella lacustris
23551643 23551643 PRJNA627467_P_NODE_10699_length_185_cov_2.242647_g10630_i0 PRJNA627467 10699 185 2.242647 4.14889695 Rosculus vulgaris 2231165 SAR_Eukaryotes SAR_Eukaryotes 268 1.44e-67   NTclustered gi|1402550474|gb|MH488760.1| 2231165 g10630 i0 93.011 69.5945945945946 186 9 100 4 1 185 2413 2595 Rosculus vulgaris isolate CCA sequence blastn 12875 268 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus vulgaris
24102633 24102633 PRJNA627467_P_NODE_17199_length_165_cov_1.750000_g17130_i0 PRJNA627467 17199 165 1.75 2.8875 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 259 7.57e-65   NTclustered gi|2735011|gb|U82204.1|BTU82204 55726 g17130 i0 95.679 98.9030303030303 162 6 98 1 1 162 344 184 Bursaria truncatella small subunit ribosomal RNA gene, complete cds blastn 16319 259 1 Eukaryota Sar   Ciliophora Colpodea Bursariomorphida Bursariidae Bursaria Bursaria truncatella

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;