RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA615351" and tax_phylum = "Vulcanimicrobiota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA615351 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
595662 595662 PRJNA615351_P_NODE_178241_length_157_cov_2.131148_g164141_i0 PRJNA615351 178241 157 2.131148 3.34590236 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 222 9.329999999999999e-54   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g164141 i0 96.324 133.687898089172 136 3 86 2 1 135 5032890 5033024 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 20989 222 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
3146304 3146304 PRJNA615351_P_NODE_109323_length_282_cov_2.951417_g95224_i0 PRJNA615351 109323 282 2.951417 8.32299594 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 431 2.859999999999999e-116   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g95224 i0 94.326 63.5531914893617 282 14 99 2 1 281 5032464 5032744 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 17922 431 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
3146369 3146369 PRJNA615351_P_NODE_137043_length_211_cov_4.272727_g122943_i0 PRJNA615351 137043 211 4.272727 9.01545397 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 233 6.169999999999999e-57   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g122943 i0 86.916 57.521327014218 214 21 99 6 1 210 5031450 5031240 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 12137 233 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
3146606 3146606 PRJNA615351_P_NODE_35643_length_992_cov_4.261233_g20404_i1 PRJNA615351 35643 992 4.261233 42.27143136 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 56.5 0.008   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g20404 i1 100 0.030241935483871 30 0 3 0 628 657 7806490 7806519 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 30 56.5 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
6973933 6973933 PRJNA615351_P_NODE_125106_length_237_cov_1.886139_g111006_i0 PRJNA615351 125106 237 1.886139 4.47014943 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 339 1.4599999999999998e-88   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g111006 i0 92.437 987.04641350211 238 17 100 1 1 237 5032064 5031827 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 233930 339 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
14624635 14624635 PRJNA615351_P_NODE_28012_length_1190_cov_3.993939_g20404_i0 PRJNA615351 28012 1190 3.993939 47.5278741 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 56.5 0.009   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g20404 i0 100 0.0252100840336134 30 0 3 0 336 365 7806519 7806490 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 30 56.5 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
15898479 15898479 PRJNA615351_P_NODE_148953_length_191_cov_2.647436_g134853_i0 PRJNA615351 148953 191 2.647436 5.05660276 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 326 8.77e-85   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g134853 i0 97.382 633.780104712042 191 5 100 0 1 191 5033572 5033762 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 121052 326 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
23548393 23548393 PRJNA615351_P_NODE_61719_length_578_cov_3.593002_g20404_i2 PRJNA615351 61719 578 3.593002 20.76755156 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 56.5 0.004   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g20404 i2 100 0.0519031141868512 30 0 5 0 214 243 7806490 7806519 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 30 56.5 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;