RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA615351" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA615351 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
595511 595511 PRJNA615351_P_NODE_129101_length_228_cov_1.450777_g115001_i0 PRJNA615351 129101 228 1.450777 3.30777156 Amphimedon queenslandica 400682 Porifera other_Eukaryota 110 1.19e-19   NTclustered gi|1133467918|ref|XM_011406801.2| 400682 g115001 i0 85.047 0.763157894736842 107 16 47 0 58 164 270 164 PREDICTED: Amphimedon queenslandica putative transmembrane protein DDB_G0267530 (LOC105313402), mRNA blastn 174 110 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica
3146382 3146382 PRJNA615351_P_NODE_144063_length_199_cov_1.914634_g129963_i0 PRJNA615351 144063 199 1.914634 3.81012166 Dysidea avara 196820 Porifera other_Eukaryota 56.5 0.001   NTclustered gi|2749574204|ref|XM_066053419.1| 196820 g129963 i0 80.519 0.693467336683417 77 12 37 1 34 107 739 663 PREDICTED: Dysidea avara uncharacterized protein (LOC136259864), mRNA blastn 138 56.5 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
13349899 13349899 PRJNA615351_P_NODE_24531_length_1295_cov_68.996032_g17877_i0 PRJNA615351 24531 1295 68.996032 893.4986144 Halichondria panicea 6063 Porifera other_Eukaryota 54.7 0.037   NTclustered gi|2719044360|ref|XM_064530375.1| 6063 g17877 i0 96.875 0.0247104247104247 32 1 2 0 1263 1294 842 811 PREDICTED: Halichondria panicea periodic tryptophan protein 1 homolog (LOC135334979), mRNA blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
14624617 14624617 PRJNA615351_P_NODE_24532_length_1295_cov_63.282540_g17877_i1 PRJNA615351 24532 1295 63.28254 819.508893 Halichondria panicea 6063 Porifera other_Eukaryota 54.7 0.037   NTclustered gi|2719044360|ref|XM_064530375.1| 6063 g17877 i1 96.875 0.0247104247104247 32 1 2 0 2 33 811 842 PREDICTED: Halichondria panicea periodic tryptophan protein 1 homolog (LOC135334979), mRNA blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;