RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA615351" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA615351 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6974022 6974022 PRJNA615351_P_NODE_156866_length_181_cov_1.047945_g142766_i0 PRJNA615351 156866 181 1.047945 1.89678045 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 63.9 7.1e-6   NTclustered gi|2806447086|ref|XM_068499026.1| 1144522 g142766 i0 100 18.2154696132597 34 0 19 0 8 41 897 930 Tritrichomonas foetus uncharacterized protein (TRFO_16520), partial mRNA blastn 3297 63.9 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
15898475 15898475 PRJNA615351_P_NODE_146713_length_195_cov_1.475000_g132613_i0 PRJNA615351 146713 195 1.475 2.87625 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 62.1 2.8e-5   NTclustered gi|2794862486|ref|XM_067914277.1| 135588 g132613 i0 94.872 0.487179487179487 39 2 20 0 2 40 202 240 Histomonas meleagridis putative phospholipid-transporting P-type ATPase (GO595_001475), partial mRNA blastn 95 62.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;