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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA615351" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA615351 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1871640 1871640 PRJNA615351_P_NODE_166002_length_169_cov_4.007463_g151902_i0 PRJNA615351 166002 169 4.007463 6.77261247 Fimicolochytrium jonesii 1396493 Fungi Fungi 52.8 0.014   NTclustered gi|2432113866|ref|XM_053068926.1| 1396493 g151902 i0 100 0.165680473372781 28 0 17 0 47 74 527 500 Fimicolochytrium jonesii uncharacterized protein (EV422DRAFT_510395), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
4423182 4423182 PRJNA615351_P_NODE_164084_length_172_cov_1.167883_g149984_i0 PRJNA615351 164084 172 1.167883 2.00875876 Spizellomyces punctatus 109760 Fungi Fungi 113 6.52e-21   NTclustered gi|1027025241|ref|XM_016756493.1| 645134 g149984 i0 78.736 3.61627906976744 174 34 99 3 2 172 732 559 Spizellomyces punctatus DAOM BR117 uncharacterized protein (SPPG_08336), mRNA blastn 622 113 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
4423585 4423585 PRJNA615351_P_NODE_98984_length_322_cov_2.560976_g84887_i0 PRJNA615351 98984 322 2.560976 8.24634272 Polychytrium aggregatum 110093 Fungi Fungi 121 8.169999999999999e-23   NTclustered gi|2432155304|ref|XM_053111518.1| 110093 g84887 i0 88.776 1.12732919254658 98 11 30 0 11 108 208 305 Polychytrium aggregatum ribosomal L27e protein family-domain-containing protein (BJ171DRAFT_510919), mRNA blastn 363 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
7527853 7527853 PRJNA615351_P_NODE_89626_length_367_cov_7.105422_g75548_i0 PRJNA615351 89626 367 7.105422 26.07689874 Powellomycetaceae 1134080 Fungi Fungi 662 0   NTclustered gi|1866582454|gb|MT730629.1| 109894 g75548 i0 99.183 100.027247956403 367 3 100 0 1 367 4159 4525 Geranomyces variabilis isolate Barr350 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 36710 667 0.992503748125937 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Geranomyces Geranomyces variabilis
10799700 10799700 PRJNA615351_P_NODE_103729_length_302_cov_4.756554_g89630_i0 PRJNA615351 103729 302 4.756554 14.36479308 Spizellomyces punctatus 109760 Fungi Fungi 246 1.2e-60   NTclustered gi|1027029543|ref|XR_001677161.1| 645134 g89630 i0 95.484 50.1986754966887 155 6 51 1 1 154 3931 4085 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11002), rRNA blastn 15160 246 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
10799836 10799836 PRJNA615351_P_NODE_153609_length_185_cov_1.333333_g139509_i0 PRJNA615351 153609 185 1.333333 2.46666605 Polychytrium aggregatum 110093 Fungi Fungi 110 9.24e-20   NTclustered gi|2432132411|ref|XM_053109501.1| 110093 g139509 i0 82.308 2.58918918918919 130 19 69 2 58 185 1088 961 Polychytrium aggregatum ribosomal protein L3-domain-containing protein (BJ171DRAFT_489537), mRNA blastn 479 110 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
14624858 14624858 PRJNA615351_P_NODE_80752_length_420_cov_20.914286_g66710_i0 PRJNA615351 80752 420 20.914286 87.8400012 Synchytrium microbalum 1806994 Fungi Fungi 366 1.2699999999999993e-96   NTclustered gi|1759157514|ref|XM_031170312.1| 1806994 g66710 i0 82.506 79.9619047619048 423 68 100 6 1 420 598 1017 Synchytrium microbalum uncharacterized protein (SmJEL517_g04384), partial mRNA blastn 33584 366 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
15178307 15178307 PRJNA615351_P_NODE_130012_length_226_cov_1.602094_g115912_i0 PRJNA615351 130012 226 1.602094 3.62073244 Chytridiomycetes 451435 Fungi Fungi 65.8 2.58e-6   NTclustered gi|1027029571|ref|XR_001677165.1| 645134 g115912 i0 100 0.752212389380531 35 0 15 0 192 226 3233 3199 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11007), partial rRNA blastn 170 65.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
15178431 15178431 PRJNA615351_P_NODE_54392_length_666_cov_2.134707_g41726_i0 PRJNA615351 54392 666 2.134707 14.21714862 Batrachochytrium 100474 Fungi Fungi 56.5 0.005   NTclustered gi|2897836978|gb|CP161927.1| 109871 g41726 i0 100 0.133633633633634 30 0 5 0 129 158 616315 616344 Batrachochytrium dendrobatidis strain JEL423 chromosome 5 blastn 89 56.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
17173675 17173675 PRJNA615351_P_NODE_45334_length_802_cov_226.363755_g34000_i0 PRJNA615351 45334 802 226.363755 1815.4373151 Polychytrium aggregatum 110093 Fungi Fungi 54.7 0.022   NTclustered gi|2432144566|ref|XM_053115345.1| 110093 g34000 i0 100 0.0361596009975062 29 0 4 0 241 269 581 553 Polychytrium aggregatum ran-specific GTPase-activating protein (BJ171DRAFT_616054), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
19722091 19722091 PRJNA615351_P_NODE_112976_length_270_cov_3.638298_g98877_i0 PRJNA615351 112976 270 3.638298 9.8234046 Spizellomyces punctatus 109760 Fungi Fungi 106 1.87e-18   NTclustered gi|1026981961|ref|XM_016752543.1| 645134 g98877 i0 94.203 0.255555555555556 69 4 26 0 155 223 149 81 Spizellomyces punctatus DAOM BR117 40S ribosomal protein S30 (SPPG_04300), mRNA blastn 69 106 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
19722576 19722576 PRJNA615351_P_NODE_85316_length_392_cov_1.792717_g71255_i0 PRJNA615351 85316 392 1.792717 7.02745064 Polychytrium aggregatum 110093 Fungi Fungi 65.8 4.81e-6   NTclustered gi|2432137562|ref|XM_053107034.1| 110093 g71255 i0 93.182 0.219387755102041 44 3 11 0 12 55 127 170 Polychytrium aggregatum P-loop containing nucleoside triphosphate hydrolase protein (BJ171DRAFT_307242), mRNA blastn 86 65.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
23548423 23548423 PRJNA615351_P_NODE_69979_length_501_cov_2.654506_g56099_i0 PRJNA615351 69979 501 2.654506 13.29907506 Polychytrium aggregatum 110093 Fungi Fungi 255 3.48e-63   NTclustered gi|2432129870|ref|XM_053107267.1| 110093 g56099 i0 79.944 11.1616766467066 359 62 71 10 148 501 236 589 Polychytrium aggregatum ribosomal protein S7 domain-containing protein (BJ171DRAFT_4084), mRNA blastn 5592 255 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
24821832 24821832 PRJNA615351_P_NODE_170000_length_165_cov_2.146154_g155900_i0 PRJNA615351 170000 165 2.146154 3.5411541 Synchytrium microbalum 1806994 Fungi Fungi 54.7 0.004   NTclustered gi|1759142093|ref|XM_031166695.1| 1806994 g155900 i0 96.97 1.89090909090909 33 0 20 1 101 133 5143 5112 Synchytrium microbalum uncharacterized protein (SmJEL517_g00766), partial mRNA blastn 312 54.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;