contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA615351" and tax_phylum = "Chloroflexota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1871679 | 1871679 | PRJNA615351_P_NODE_176822_length_159_cov_0.975806_g162722_i0 | PRJNA615351 | 176822 | 159 | 0.975806 | 1.55153154 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 189 | 9.62e-44 | NTclustered | gi|2874253860|emb|OY969916.1| | 1672391 | g162722 | i0 | 93.651 | 2.27672955974843 | 126 | 8 | 79 | 0 | 1 | 126 | 273051 | 273176 | MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 | blastn | 362 | 189 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 4423023 | 4423023 | PRJNA615351_P_NODE_109104_length_283_cov_2.004032_g95005_i0 | PRJNA615351 | 109104 | 283 | 2.004032 | 5.67141056 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 255 | 1.85e-63 | NTclustered | gi|2874253860|emb|OY969916.1| | 1672391 | g95005 | i0 | 83.453 | 194.787985865724 | 278 | 42 | 97 | 3 | 4 | 278 | 274536 | 274812 | MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 | blastn | 55125 | 255 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 4423189 | 4423189 | PRJNA615351_P_NODE_166604_length_169_cov_1.380597_g152504_i0 | PRJNA615351 | 166604 | 169 | 1.380597 | 2.33320893 | Caldilineaceae bacterium | 2614250 | Bacteria | Bacteria | 143 | 8.139999999999998e-30 | NTclustered | gi|2893358382|emb|OZ220676.1| | 2614250 | g152504 | i0 | 83.333 | 78.2189349112426 | 162 | 20 | 93 | 7 | 1 | 158 | 357184 | 357342 | MAG: Caldilineaceae bacterium isolate 6911f4b3-f793-4dac-9473-b80504ec0e1d genome assembly, chromosome: 1 | blastn | 13219 | 143 | 1 | Bacteria | Bacillati | Chloroflexota | Caldilineae | Caldilineales | Caldilineaceae | Caldilineaceae bacterium | |||
| 6253758 | 6253758 | PRJNA615351_P_NODE_84805_length_395_cov_1.711111_g70744_i0 | PRJNA615351 | 84805 | 395 | 1.711111 | 6.75888845 | Roseiflexus | 120961 | Bacteria | Bacteria | 425 | 1.93e-114 | NTclustered | gi|470482403|ref|NR_076530.1| | 120962 | g70744 | i0 | 88.483 | 101.549367088608 | 356 | 35 | 89 | 5 | 2 | 353 | 955 | 602 | Roseiflexus castenholzii strain HLO8 23S ribosomal RNA gene, complete sequence | blastn | 40112 | 425 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Roseiflexaceae | Roseiflexus | Roseiflexus castenholzii | ||
| 13903980 | 13903980 | PRJNA615351_P_NODE_94371_length_343_cov_3.074675_g80282_i0 | PRJNA615351 | 94371 | 343 | 3.074675 | 10.54613525 | Caldilinea | 233191 | Bacteria | Bacteria | 442 | 1.6499999999999995e-119 | NTclustered | gi|470476010|ref|NR_076314.1| | 133453 | g80282 | i0 | 90.265 | 20.0116618075802 | 339 | 32 | 99 | 1 | 1 | 338 | 1666 | 1328 | Caldilinea aerophila strain STL-6-O1 23S ribosomal RNA gene, complete sequence | blastn | 6864 | 442 | 1 | Bacteria | Bacillati | Chloroflexota | Caldilineae | Caldilineales | Caldilineaceae | Caldilinea | Caldilinea aerophila | ||
| 20276427 | 20276427 | PRJNA615351_P_NODE_177716_length_158_cov_1.300813_g163616_i0 | PRJNA615351 | 177716 | 158 | 1.300813 | 2.05528454 | Caldilinea | 233191 | Bacteria | Bacteria | 165 | 1.61e-36 | NTclustered | gi|470476010|ref|NR_076314.1| | 133453 | g163616 | i0 | 86.986 | 60.6772151898734 | 146 | 19 | 92 | 0 | 13 | 158 | 711 | 856 | Caldilinea aerophila strain STL-6-O1 23S ribosomal RNA gene, complete sequence | blastn | 9587 | 165 | 1 | Bacteria | Bacillati | Chloroflexota | Caldilineae | Caldilineales | Caldilineaceae | Caldilinea | Caldilinea aerophila | ||
| 22272720 | 22272720 | PRJNA615351_P_NODE_138178_length_209_cov_3.367816_g124078_i0 | PRJNA615351 | 138178 | 209 | 3.367816 | 7.03873544 | Roseiflexus sp. RS-1 | 357808 | Bacteria | Bacteria | 137 | 4.92e-28 | NTclustered | gi|470481958|ref|NR_076505.1| | 357808 | g124078 | i0 | 80.645 | 102.043062200957 | 186 | 28 | 89 | 6 | 24 | 208 | 199 | 21 | Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence | blastn | 21327 | 137 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Roseiflexaceae | Roseiflexus | Roseiflexus sp. RS-1 | ||
| 23548166 | 23548166 | PRJNA615351_P_NODE_168739_length_167_cov_1.053030_g154639_i0 | PRJNA615351 | 168739 | 167 | 1.05303 | 1.7585601 | Roseiflexus sp. RS-1 | 357808 | Bacteria | Bacteria | 128 | 2.26e-25 | NTclustered | gi|470481958|ref|NR_076505.1| | 357808 | g154639 | i0 | 90.722 | 5.88622754491018 | 97 | 8 | 58 | 1 | 21 | 117 | 248 | 153 | Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence | blastn | 983 | 128 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Roseiflexaceae | Roseiflexus | Roseiflexus sp. RS-1 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;