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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA615351" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA615351 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
595896 595896 PRJNA615351_P_NODE_64861_length_547_cov_104.810547_g51258_i0 PRJNA615351 64861 547 104.810547 573.31369209 Cercomonas sp. HFCC53 458867 SAR_Eukaryotes SAR_Eukaryotes 918 0   NTclustered gi|161015705|gb|EF681939.1| 458867 g51258 i0 97.232 49.1042047531993 542 15 99 0 1 542 649 108 Cercomonas sp. HFCC53 28S ribosomal RNA gene, partial sequence blastn 26860 918 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC53
3146441 3146441 PRJNA615351_P_NODE_162523_length_173_cov_2.797101_g148423_i0 PRJNA615351 162523 173 2.797101 4.83898473 Verrucomonas longifila 629764 SAR_Eukaryotes SAR_Eukaryotes 152 1.3899999999999998e-32   NTclustered gi|290760489|gb|GQ144692.1| 629764 g148423 i0 85.616 48.5953757225434 146 19 84 2 1 146 1388 1245 Cercozoa sp. CC-2009f large subunit ribosomal RNA gene, partial sequence blastn 8407 152 1 Eukaryota Sar   Cercozoa Thecofilosea Ventricleftida   Verrucomonas Verrucomonas longifila
4423232 4423232 PRJNA615351_P_NODE_181964_length_154_cov_1.680672_g167864_i0 PRJNA615351 181964 154 1.680672 2.58823488 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 235 1.17e-57   NTclustered gi|302026201|gb|GQ377711.1| 323453 g167864 i0 94.156 99.025974025974 154 9 100 0 1 154 373 526 Heteromita sp. PRA-74 alpha-tubulin-like mRNA, partial sequence blastn 15250 235 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
8248666 8248666 PRJNA615351_P_NODE_128567_length_229_cov_1.695876_g114467_i0 PRJNA615351 128567 229 1.695876 3.88355604 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 363 8.309999999999999e-96   NTclustered gi|238617605|gb|FJ973380.1| 45107 g114467 i0 95.595 98.8733624454148 227 9 99 1 4 229 1581 1355 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 22642 363 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
12074825 12074825 PRJNA615351_P_NODE_126330_length_234_cov_1.969849_g112230_i0 PRJNA615351 126330 234 1.969849 4.60944666 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 204 5.4699999999999994e-48   NTclustered gi|47028272|gb|AY542977.1| 227086 g112230 i0 85.075 5.01282051282051 201 28 85 2 35 234 358 159 Bigelowiella natans ADP ribosylation factor 1 (ARF1) mRNA, complete cds blastn 1173 204 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
12074920 12074920 PRJNA615351_P_NODE_159230_length_177_cov_4.598592_g145130_i0 PRJNA615351 159230 177 4.598592 8.13950784 Paracercomonas sp. 1979800 SAR_Eukaryotes SAR_Eukaryotes 283 4.87e-72   NTclustered gi|1326162414|gb|MG775634.1| 1979800 g145130 i0 96.491 95.9830508474576 171 6 97 0 1 171 1778 1608 Paracercomonas sp. strain SF61_P_Poa small subunit ribosomal RNA gene, partial sequence blastn 16989 283 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas sp.
13350064 13350064 PRJNA615351_P_NODE_66671_length_530_cov_108.202020_g52949_i0 PRJNA615351 66671 530 108.20202 573.470706 Cercomonas sp. HFCC549 458874 SAR_Eukaryotes SAR_Eukaryotes 863 0   NTclustered gi|161015714|gb|EF681948.1| 458874 g52949 i0 96.374 48.9264150943396 524 19 99 0 6 529 137 660 Cercomonas sp. HFCC549 28S ribosomal RNA gene, partial sequence blastn 25931 863 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC549
15898516 15898516 PRJNA615351_P_NODE_160233_length_176_cov_1.985816_g146133_i0 PRJNA615351 160233 176 1.985816 3.49503616 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 226 8.269999999999997e-55   NTclustered gi|302026201|gb|GQ377711.1| 323453 g146133 i0 89.773 92.4034090909091 176 18 100 0 1 176 139 314 Heteromita sp. PRA-74 alpha-tubulin-like mRNA, partial sequence blastn 16263 226 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
18447990 18447990 PRJNA615351_P_NODE_79515_length_428_cov_19.027990_g65482_i0 PRJNA615351 79515 428 19.02799 81.4397972 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 416 1.27e-111   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g65482 i0 86.432 50.3060747663551 398 32 92 13 36 428 4039 3659 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 21531 416 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
18448002 18448002 PRJNA615351_P_NODE_81195_length_417_cov_5.293194_g67150_i0 PRJNA615351 81195 417 5.293194 22.07261898 Amorphochlora amoebiformis 1561963 SAR_Eukaryotes SAR_Eukaryotes 108 8.44e-19   NTclustered gi|27734334|gb|AY099122.1| 1561963 g67150 i0 85.577 11.8225419664269 104 13 25 2 12 114 55 157 Lotharella amoeboformis isolate pub2 polyubiquitin gene, partial cds blastn 4930 108 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Amorphochlora Amorphochlora amoebiformis
19001375 19001375 PRJNA615351_P_NODE_150435_length_189_cov_1.883117_g136335_i0 PRJNA615351 150435 189 1.883117 3.55909113 Guttulinopsis 1144921 SAR_Eukaryotes SAR_Eukaryotes 350 5.14e-92   NTclustered gi|1402550487|gb|MH488773.1| 2231167 g136335 i0 100 6.98941798941799 189 0 100 0 1 189 246 434 Guttulinopsis sp. isolate STA small subunit ribosomal RNA gene, partial sequence blastn 1321 350 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis sp.
23548071 23548071 PRJNA615351_P_NODE_135319_length_215_cov_1.383333_g121219_i0 PRJNA615351 135319 215 1.383333 2.97416595 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 392 9.83e-105   NTclustered gi|1402550485|gb|MH488771.1| 2231170 g121219 i0 99.535 8.97209302325581 215 1 100 0 1 215 1853 1639 Guttulinopsis rogosa isolate ATCC 50030 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 1929 392 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;