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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA615351" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 7 ✖

bioproject 1

  • PRJNA615351 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3146507 3146507 PRJNA615351_P_NODE_183623_length_153_cov_1.347458_g169523_i0 PRJNA615351 183623 153 1.347458 2.06161074 Halodesulfurarchaeum formicicum 1873524 Archaea Archaea 73.1 9.62e-9   NTclustered gi|1108596108|gb|CP016804.1| 1873524 g169523 i0 92.157 0.535947712418301 51 4 33 0 56 106 579546 579496 Halodesulfurarchaeum formicicum strain HSR6 chromosome, complete genome blastn 82 73.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halodesulfurarchaeum Halodesulfurarchaeum formicicum
7527703 7527703 PRJNA615351_P_NODE_130666_length_224_cov_4.079365_g116566_i0 PRJNA615351 130666 224 4.079365 9.1377776 root 1 Root_unresolved Root_unresolved 62.1 3.31e-5   NTclustered gi|289529249|gb|CP001932.1| 547559 g116566 i0 92.857 5.20535714285714 42 3 19 0 1 42 1715765 1715724 Natrialba magadii ATCC 43099, complete sequence blastn 1166 62.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrialba Natrialba magadii
14624433 14624433 PRJNA615351_P_NODE_136052_length_213_cov_2.471910_g121952_i0 PRJNA615351 136052 213 2.47191 5.2651683 Natrialba magadii 13769 Archaea Archaea 62.1 3.11e-5   NTclustered gi|289529249|gb|CP001932.1| 547559 g121952 i0 89.796 2.13615023474178 49 3 23 1 91 139 3110939 3110985 Natrialba magadii ATCC 43099, complete sequence blastn 455 62.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrialba Natrialba magadii
17727907 17727907 PRJNA615351_P_NODE_61374_length_581_cov_832.677656_g48024_i0 PRJNA615351 61374 581 832.677656 4837.85718136 root 1 Root_unresolved Root_unresolved 968 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g48024 i0 96.73 387.127366609294 581 19 100 0 1 581 3116333 3115753 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 224921 968 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
19722180 19722180 PRJNA615351_P_NODE_141156_length_204_cov_1.887574_g127056_i0 PRJNA615351 141156 204 1.887574 3.85065096 Natranaeroarchaeum sulfidigenes 2784880 Archaea Archaea 54.7 0.005   NTclustered gi|1995626524|gb|CP064786.1| 2784880 g127056 i0 100 0.142156862745098 29 0 14 0 164 192 2224238 2224266 Natranaeroarchaeum sulfidigenes strain AArc-S chromosome, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronoarchaeaceae Natranaeroarchaeum Natranaeroarchaeum sulfidigenes
23548312 23548312 PRJNA615351_P_NODE_38679_length_926_cov_2.983165_g28673_i0 PRJNA615351 38679 926 2.983165 27.6241079 Candidatus Methanophaga sp. ANME-1 ERB7 2759913 Archaea Archaea 56.5 0.007   NTclustered gi|1899284545|gb|MT631633.1| 2759913 g28673 i0 100 0.0323974082073434 30 0 3 0 418 447 27419 27390 Candidatus Methanophaga sp. ANME-1 ERB7 clone GZfos33E12_3634809 seq_00001 genomic sequence blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Candidatus Methanophagales Candidatus Methanophagaceae Candidatus Methanophaga Candidatus Methanophaga sp. ANME-1 ERB7
24821765 24821765 PRJNA615351_P_NODE_144380_length_199_cov_0.975610_g130280_i0 PRJNA615351 144380 199 0.97561 1.9414639 Methanobrevibacter sp. YE315 1609968 Archaea Archaea 56.5 0.001   NTclustered gi|985614202|gb|CP010834.1| 1609968 g130280 i0 100 0.587939698492462 30 0 15 0 168 197 1389617 1389588 Methanobrevibacter sp. YE315, complete genome blastn 117 56.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. YE315

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;