RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA615351" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA615351 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4423162 4423162 PRJNA615351_P_NODE_156944_length_180_cov_3.537931_g142844_i0 PRJNA615351 156944 180 3.537931 6.3682758 Hokovirus HKV1 1977638 Viruses Viruses 165 1.88e-36   NTclustered gi|1174571674|gb|KY684104.1| 1977638 g142844 i0 83.815 26.4 173 28 96 0 6 178 162615 162787 Hokovirus HKV1 isolate HKV1 clone Hokovirus_2, sequence blastn 4752 165 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Hokovirus Hokovirus HKV1
17173659 17173659 PRJNA615351_P_NODE_42114_length_860_cov_2.872727_g31394_i0 PRJNA615351 42114 860 2.872727 24.7054522 Harvfovirus sp. 2487768 Viruses Viruses 62.1 1.44e-4   NTclustered gi|1512477227|gb|MK072296.1| 2487768 g31394 i0 89.583 1.05581395348837 48 5 6 0 3 50 1580 1627 MAG: Harvfovirus sp. clone Harvfovirus_54 genomic sequence blastn 908 62.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Harvfovirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;