RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA615351" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 7 ✖

bioproject 1

  • PRJNA615351 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
595811 595811 PRJNA615351_P_NODE_41781_length_866_cov_4.202166_g31128_i0 PRJNA615351 41781 866 4.202166 36.39075756 Thecamonas trahens 529818 Root_unresolved Root_unresolved 364 9.869999999999999e-96   NTclustered gi|923129792|ref|XM_013902908.1| 461836 g31128 i0 84.865 34.2090069284065 370 46 42 8 462 826 376 12 Thecamonas trahens ATCC 50062 Ras-like C3 botulinum toxin substrate 1 (AMSG_04690), mRNA blastn 29625 364 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
3146370 3146370 PRJNA615351_P_NODE_137423_length_211_cov_1.488636_g123323_i0 PRJNA615351 137423 211 1.488636 3.14102196 Thecamonas trahens 529818 Root_unresolved Root_unresolved 67.6 6.62e-7   NTclustered gi|923119197|ref|XM_013897619.1| 461836 g123323 i0 88.889 0.255924170616114 54 6 26 0 103 156 521 574 Thecamonas trahens ATCC 50062 poly-zinc finger protein 1 (AMSG_11014), partial mRNA blastn 54 67.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
14624484 14624484 PRJNA615351_P_NODE_153392_length_185_cov_1.726667_g139292_i0 PRJNA615351 153392 185 1.726667 3.19433395 Thecamonas trahens 529818 Root_unresolved Root_unresolved 102 1.55e-17   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g139292 i0 95.312 1.09189189189189 64 3 35 0 56 119 198 261 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 202 102 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
15898449 15898449 PRJNA615351_P_NODE_140153_length_206_cov_1.526316_g126053_i0 PRJNA615351 140153 206 1.526316 3.14421096 Thecamonas trahens 529818 Root_unresolved Root_unresolved 191 3.66e-44   NTclustered gi|923138884|ref|XM_013907453.1| 461836 g126053 i0 84.158 4 202 27 97 5 8 206 647 448 Thecamonas trahens ATCC 50062 elongation factor 2 (AMSG_00036), mRNA blastn 824 191 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
19722139 19722139 PRJNA615351_P_NODE_12776_length_1830_cov_5.194986_g9178_i0 PRJNA615351 12776 1830 5.194986 95.0682438 Thecamonas trahens 529818 Root_unresolved Root_unresolved 60.2 0.001   NTclustered gi|923137364|ref|XM_013906693.1| 461836 g9178 i0 100 0.0174863387978142 32 0 2 0 923 954 84 53 Thecamonas trahens ATCC 50062 AGC protein kinase (AMSG_00970), mRNA blastn 32 60.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
19722182 19722182 PRJNA615351_P_NODE_142296_length_202_cov_1.856287_g128196_i0 PRJNA615351 142296 202 1.856287 3.74969974 Thecamonas trahens 529818 Root_unresolved Root_unresolved 119 1.71e-22   NTclustered gi|923134338|ref|XM_013905181.1| 461836 g128196 i0 80.519 0.762376237623762 154 30 76 0 42 195 1042 889 Thecamonas trahens ATCC 50062 chaperonin containing TCP1 (AMSG_02794), mRNA blastn 154 119 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
22272788 22272788 PRJNA615351_P_NODE_160218_length_176_cov_1.985816_g146118_i0 PRJNA615351 160218 176 1.985816 3.49503616 Thecamonas trahens 529818 Root_unresolved Root_unresolved 143 8.56e-30   NTclustered gi|923139166|ref|XM_013907594.1| 461836 g146118 i0 81.356 17.4375 177 31 100 2 1 176 217 42 Thecamonas trahens ATCC 50062 peptidyl-prolyl cis-trans isomerase (AMSG_00186), partial mRNA blastn 3069 143 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;