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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA615175" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA615175 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1149863 1149863 PRJNA615175_P_NODE_3941_length_783_cov_4.183099_g3788_i0 PRJNA615175 3941 783 4.183099 32.75366517 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 1317 0   NTclustered gi|2651357791|gb|PP174306.1| 41631 g3788 i0 97.066 75.3563218390805 784 20 100 2 1 783 2556 1775 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 59004 1319 0.998483699772555 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
4422766 4422766 PRJNA615175_P_NODE_7904_length_534_cov_2.869848_g7738_i0 PRJNA615175 7904 534 2.869848 15.32498832 Philasterida sp. 2006707 SAR_Eukaryotes SAR_Eukaryotes 294 7.89e-75   NTclustered gi|2354193480|gb|OP896969.1| 2006707 g7738 i0 78.602 41.6217228464419 472 82 86 16 71 529 1263 798 Philasterida sp. strain tDaCF9_52 large subunit ribosomal RNA gene, partial sequence blastn 22226 294 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida     Philasterida sp.
5698749 5698749 PRJNA615175_P_NODE_4825_length_704_cov_2.833597_g4664_i0 PRJNA615175 4825 704 2.833597 19.94852288 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.02   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g4664 i0 100 0.0411931818181818 29 0 4 0 676 704 37 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
6973318 6973318 PRJNA615175_P_NODE_21226_length_300_cov_1.356828_g21058_i0 PRJNA615175 21226 300 1.356828 4.070484 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 555 1.7399999999999995e-153   NTclustered gi|10782|emb|X54004.1| 5908 g21058 i0 100 94.0433333333333 300 0 100 0 1 300 1586 1885 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 28213 555 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
8248096 8248096 PRJNA615175_P_NODE_2467_length_981_cov_4.700441_g2343_i0 PRJNA615175 2467 981 4.700441 46.11132621 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.008   NTclustered gi|829161416|ref|XM_001010445.2| 312017 g2343 i0 97.059 0.0346585117227319 34 0 3 1 667 699 6 39 Tetrahymena thermophila SB210 IPT/TIG domain protein partial mRNA blastn 34 56.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
10799070 10799070 PRJNA615175_P_NODE_16209_length_349_cov_4.561594_g16041_i0 PRJNA615175 16209 349 4.561594 15.91996306 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 628 1.1999999999999999e-175   NTclustered gi|10782|emb|X54004.1| 5908 g16041 i0 99.143 64.4097421203438 350 2 100 1 1 349 2413 2762 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 22479 628 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
12628786 12628786 PRJNA615175_P_NODE_11970_length_416_cov_5.836735_g11802_i0 PRJNA615175 11970 416 5.836735 24.2808176 Philasterides 282687 SAR_Eukaryotes SAR_Eukaryotes 520 9.13e-143   NTclustered gi|1484640847|gb|MK002746.1| 282688 g11802 i0 89.286 63.0961538461538 420 37 100 8 1 416 3958 4373 Philasterides dicentrarchi isolate I1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 26248 520 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Philasteridae Philasterides Philasterides dicentrarchi
20997003 20997003 PRJNA615175_P_NODE_11657_length_423_cov_4.251429_g11489_i0 PRJNA615175 11657 423 4.251429 17.98354467 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.041   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g11489 i0 100 0.066193853427896 28 0 7 0 1 28 11 38 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
22271928 22271928 PRJNA615175_P_NODE_13438_length_388_cov_9.495238_g13270_i0 PRJNA615175 13438 388 9.495238 36.84152344 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.01   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g13270 i0 100 0.36340206185567 29 0 7 0 360 388 38 10 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 141 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
23547289 23547289 PRJNA615175_P_NODE_13759_length_383_cov_2.096774_g13591_i0 PRJNA615175 13759 383 2.096774 8.03064442 Epistylis sp. FG-2015 1607876 SAR_Eukaryotes SAR_Eukaryotes 641 1.7e-179   NTclustered gi|759083557|gb|KM222174.1| 1607876 g13591 i0 99.157 90.2584856396867 356 3 93 0 1 356 356 1 Epistylis sp. FG-2015 voucher SZ2011052302 large subunit ribosomal RNA gene, partial sequence blastn 34569 641 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Epistylidae Epistylis Epistylis sp. FG-2015

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;