contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA615175" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4977988 | 4977988 | PRJNA615175_P_NODE_33464_length_243_cov_1.811765_g33296_i0 | PRJNA615175 | 33464 | 243 | 1.811765 | 4.40258895 | Bdellovibrio | 958 | Bacteria | Bacteria | 438 | 1.4399999999999996e-118 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g33296 | i0 | 99.177 | 88.3456790123457 | 243 | 2 | 100 | 0 | 1 | 243 | 816610 | 816368 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 21468 | 438 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 6973365 | 6973365 | PRJNA615175_P_NODE_23806_length_280_cov_1.961353_g23638_i0 | PRJNA615175 | 23806 | 280 | 1.961353 | 5.4917884 | Bdellovibrio svalbardensis | 2972972 | Bacteria | Bacteria | 374 | 4.849999999999998e-99 | NTclustered | gi|2593445765|gb|OR698905.1| | 2972972 | g23638 | i0 | 98.131 | 74.1071428571429 | 214 | 4 | 76 | 0 | 67 | 280 | 2 | 215 | Bdellovibrio svalbardensis 16S ribosomal RNA gene, partial sequence | blastn | 20750 | 374 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio svalbardensis | ||
| 6973670 | 6973670 | PRJNA615175_P_NODE_9646_length_474_cov_2.501247_g9478_i0 | PRJNA615175 | 9646 | 474 | 2.501247 | 11.85591078 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 822 | 0 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g9478 | i0 | 97.899 | 184.835443037975 | 476 | 8 | 100 | 2 | 1 | 474 | 512105 | 511630 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 87612 | 822 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 9523215 | 9523215 | PRJNA615175_P_NODE_16048_length_351_cov_2.755396_g15880_i0 | PRJNA615175 | 16048 | 351 | 2.755396 | 9.67143996 | Bdellovibrio sp. NC01 | 2220073 | Bacteria | Bacteria | 267 | 1.09e-66 | NTclustered | gi|1700686220|gb|CP030034.1| | 2220073 | g15880 | i0 | 80.508 | 5.02849002849003 | 354 | 63 | 100 | 6 | 1 | 351 | 1666763 | 1667113 | Bdellovibrio sp. NC01 chromosome, complete genome | blastn | 1765 | 267 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. NC01 | ||
| 10799467 | 10799467 | PRJNA615175_P_NODE_6189_length_613_cov_4.700000_g6024_i0 | PRJNA615175 | 6189 | 613 | 4.7 | 28.811 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 595 | 2.2399999999999995e-165 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g6024 | i0 | 84.202 | 61.4942903752039 | 614 | 95 | 100 | 2 | 1 | 613 | 3613644 | 3614256 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 37696 | 595 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 12074062 | 12074062 | PRJNA615175_P_NODE_11950_length_417_cov_1.613372_g11782_i0 | PRJNA615175 | 11950 | 417 | 1.613372 | 6.72776124 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 675 | 0 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g11782 | i0 | 98.187 | 69.599520383693 | 386 | 7 | 93 | 0 | 1 | 386 | 1292645 | 1292260 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 29023 | 675 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 16452652 | 16452652 | PRJNA615175_P_NODE_9693_length_473_cov_2.107500_g9525_i0 | PRJNA615175 | 9693 | 473 | 2.1075 | 9.968475 | Peredibacter | 263370 | Bacteria | Bacteria | 809 | 0 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g9525 | i0 | 97.665 | 189.30866807611 | 471 | 11 | 99 | 0 | 1 | 471 | 511640 | 511170 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 89543 | 809 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 20276193 | 20276193 | PRJNA615175_P_NODE_15896_length_353_cov_2.171429_g15728_i0 | PRJNA615175 | 15896 | 353 | 2.171429 | 7.66514437 | Bdellovibrio | 958 | Bacteria | Bacteria | 294 | 5.02e-75 | NTclustered | gi|2801803968|gb|CP169237.1| | 959 | g15728 | i0 | 81.766 | 1.98016997167139 | 351 | 64 | 99 | 0 | 3 | 353 | 2216376 | 2216026 | Bdellovibrio bacteriovorus strain Bd3 chromosome, complete genome | blastn | 699 | 294 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;