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contig_metadata

24 rows where analysis = "blastn", bioproject = "PRJNA615175" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 24 ✖

bioproject 1

  • PRJNA615175 · 24 ✖

analysis 1

  • blastn · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1149797 1149797 PRJNA615175_P_NODE_12981_length_396_cov_1.566563_g12813_i0 PRJNA615175 12981 396 1.566563 6.20358948 Trebouxiophyceae 75966 Plants Plants 665 0   NTclustered gi|371782094|emb|HE610126.1| 33092 g12813 i0 96.97 100.247474747475 396 12 100 0 1 396 4306 4701 Koliella longiseta 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain SAG 470-1 blastn 39698 665 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Koliellaceae Koliella Koliella longiseta
3146032 3146032 PRJNA615175_P_NODE_4863_length_700_cov_7.063796_g4702_i0 PRJNA615175 4863 700 7.063796 49.446572 Dunaliella salina 3046 Plants Plants 409 3.6e-109   NTclustered gi|90191868|gb|DQ414847.1| 3046 g4702 i0 79.35 73.1557142857143 615 101 86 22 102 700 787 183 Dunaliella salina major light-harvesting chlorophyll a/b protein 2.1 mRNA, complete cds blastn 51209 409 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
5698377 5698377 PRJNA615175_P_NODE_16685_length_344_cov_1.678967_g16517_i0 PRJNA615175 16685 344 1.678967 5.77564648 Pleurastrum terricola 34116 Plants Plants 636 7.059999999999998e-178   NTclustered gi|153805558|ref|NC_009681.1| 34116 g16517 i0 100 101.468023255814 344 0 100 0 1 344 1215 872 Leptosira terrestris chloroplast, complete genome blastn 34905 636 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Pleurastraceae Pleurastrum Pleurastrum terricola
6973224 6973224 PRJNA615175_P_NODE_15406_length_359_cov_2.706294_g15238_i0 PRJNA615175 15406 359 2.706294 9.71559546 Trebouxia lynnae 1825957 Plants Plants 307 6.570000000000001e-79   NTclustered gi|1750939486|gb|MH917293.1| 1825957 g15238 i0 82.222 3.56824512534819 360 60 99 4 1 358 4214 3857 Trebouxia sp. TR9 mitochondrion, complete genome blastn 1281 307 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia lynnae
6973640 6973640 PRJNA615175_P_NODE_7406_length_554_cov_4.744283_g7241_i0 PRJNA615175 7406 554 4.744283 26.28332782 Ulva compressa 63659 Plants Plants 896 0   NTclustered gi|2043344315|gb|MW344287.1| 63659 g7241 i0 95.848 113.416967509025 554 23 100 0 1 554 53559 53006 Ulva compressa isolate Uco2 plastid, complete genome blastn 62833 896 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva compressa
7527595 7527595 PRJNA615175_P_NODE_25906_length_264_cov_2.748691_g25738_i0 PRJNA615175 25906 264 2.748691 7.25654424 Eukaryota 2759 Plants Plants 54.7 0.007   NTclustered gi|2082238730|ref|XM_043059385.1| 3055 g25738 i0 100 3.62121212121212 29 0 11 0 17 45 865 893 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g089237v5), mRNA blastn 956 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
8248081 8248081 PRJNA615175_P_NODE_23567_length_282_cov_1.473684_g23399_i0 PRJNA615175 23567 282 1.473684 4.15578888 Prototheca wickerhamii 3111 Plants Plants 505 1.6599999999999995e-138   NTclustered gi|2674558858|gb|PP291739.1| 3111 g23399 i0 98.936 2 282 3 100 0 1 282 19823 20104 Prototheca wickerhamii strain PK9 plastid, complete genome blastn 564 505 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
10799447 10799447 PRJNA615175_P_NODE_4709_length_713_cov_3.587500_g4549_i0 PRJNA615175 4709 713 3.5875 25.578875 Chlamydomonas reinhardtii 3055 Plants Plants 422 4.72e-113   NTclustered gi|2082248650|ref|XM_043063418.1| 3055 g4549 i0 83.047 12.7573632538569 466 77 65 2 206 670 852 388 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g290950v5), mRNA blastn 9096 422 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
12074572 12074572 PRJNA615175_P_NODE_9510_length_478_cov_2.281481_g9342_i0 PRJNA615175 9510 478 2.281481 10.90547918 Trebouxia sp. SL0000003 3350044 Plants Plants 289 3.26e-73   NTclustered gi|2917929696|emb|OZ234923.1| 3350044 g9342 i0 86.641 0.548117154811716 262 33 55 2 1 261 1493655 1493915 Trebouxia sp. SL0000003 genome assembly, chromosome: 18 blastn 262 289 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
13349053 13349053 PRJNA615175_P_NODE_20871_length_303_cov_1.339130_g20703_i0 PRJNA615175 20871 303 1.33913 4.0575639 Chlorella variabilis 554065 Plants Plants 156 2.09e-33   NTclustered gi|552848907|ref|XM_005852154.1| 554065 g20703 i0 81.218 1.25082508250825 197 33 64 4 98 292 3276 3082 Chlorella variabilis hypothetical protein (GLYD1) mRNA, complete cds blastn 379 156 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
16452648 16452648 PRJNA615175_P_NODE_9333_length_484_cov_2.732360_g9165_i0 PRJNA615175 9333 484 2.73236 13.2246224 Ulva 3118 Plants Plants 544 6.38e-150   NTclustered gi|807046084|gb|KP720616.1| 1641711 g9165 i0 89.376 89.154958677686 433 44 89 2 53 484 67953 68384 Ulva sp. UNA00071828 chloroplast, complete genome blastn 43151 549 0.990892531876138 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva sp. UNA00071828
17727721 17727721 PRJNA615175_P_NODE_9714_length_472_cov_2.982456_g9546_i0 PRJNA615175 9714 472 2.982456 14.07719232 Chlorellaceae 35461 Plants Plants 287 1.16e-72   NTclustered gi|1401669229|gb|MH295835.1| 2219871 g9546 i0 79.114 100.637711864407 474 55 99 23 2 472 977 1409 Chlorella endosymbiont of Stentor polymorphus 28S ribosomal RNA gene, partial sequence blastn 47501 287 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella endosymbiont of Stentor polymorphus
18446966 18446966 PRJNA615175_P_NODE_2615_length_954_cov_2.721907_g2488_i0 PRJNA615175 2615 954 2.721907 25.966992780000002 Chlamydomonas reinhardtii 3055 Plants Plants 614 9.819999999999999e-171   NTclustered gi|2082248989|ref|XM_001691400.2| 3055 g2488 i0 82.714 67.3448637316562 700 111 73 9 1 695 860 1554 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g298650v5), mRNA blastn 64247 614 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
19721799 19721799 PRJNA615175_P_NODE_5036_length_687_cov_6.832248_g4874_i0 PRJNA615175 5036 687 6.832248 46.93754376 Coccomyxa subellipsoidea 248742 Plants Plants 268 6.25e-67   NTclustered gi|545367700|ref|XM_005648603.1| 574566 g4874 i0 79.381 1.62008733624454 388 74 56 6 26 410 150 534 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 1113 268 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
19721815 19721815 PRJNA615175_P_NODE_616_length_1648_cov_5.455873_g567_i0 PRJNA615175 616 1648 5.455873 89.91278704 Chlamydomonas reinhardtii 3055 Plants Plants 1389 0   NTclustered gi|2082248989|ref|XM_001691400.2| 3055 g567 i0 89.526 62.5224514563107 1098 113 67 2 552 1648 1563 467 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g298650v5), mRNA blastn 103037 1389 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
19721826 19721826 PRJNA615175_P_NODE_6636_length_590_cov_1.502901_g6471_i0 PRJNA615175 6636 590 1.502901 8.8671159 Chlamydomonas reinhardtii 3055 Plants Plants 307 1.13e-78   NTclustered gi|2082268533|ref|XM_001695875.2| 3055 g6471 i0 81.994 18.4118644067797 361 65 61 0 27 387 509 869 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_16g673650v5), mRNA blastn 10863 307 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
20276169 20276169 PRJNA615175_P_NODE_10556_length_450_cov_2.787798_g10388_i0 PRJNA615175 10556 450 2.787798 12.545091 Ignatiaceae 2682551 Plants Plants 265 5.139999999999999e-66   NTclustered gi|1197710196|ref|NC_034712.1| 231078 g10388 i0 81.595 40.4777777777778 326 55 72 5 2 325 168770 169092 Ignatius tetrasporus culture UTEX:2012 chloroplast, complete genome blastn 18215 265 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ignatiales Ignatiaceae Ignatius Ignatius tetrasporus
20997048 20997048 PRJNA615175_P_NODE_14837_length_367_cov_1.690476_g14669_i0 PRJNA615175 14837 367 1.690476 6.20404692 Chaetopeltis orbicularis 56002 Plants Plants 499 1.04e-136   NTclustered gi|6120005|gb|AF183465.1| 56002 g14669 i0 91.328 100.760217983651 369 27 100 5 1 367 1757 1392 Chaetopeltis orbicularis strain UTEX 422 28S ribosomal RNA gene, partial sequence blastn 36979 499 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chaetopeltidales Chaetopeltidaceae Chaetopeltis Chaetopeltis orbicularis
20997136 20997136 PRJNA615175_P_NODE_19637_length_314_cov_1.244813_g19469_i0 PRJNA615175 19637 314 1.244813 3.90871282 Coccomyxa subellipsoidea 248742 Plants Plants 171 7.77e-38   NTclustered gi|545374848|ref|XM_005651606.1| 574566 g19469 i0 82.09 0.640127388535032 201 34 64 2 3 202 312 113 Coccomyxa subellipsoidea C-169 ribosomal protein S26 component of cytosolic 80S ribosome and 40S small subunit mRNA blastn 201 171 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
20997466 20997466 PRJNA615175_P_NODE_5817_length_634_cov_9.855615_g5652_i0 PRJNA615175 5817 634 9.855615 62.4845991 Desmochloris halophila 138176 Plants Plants 1149 0   NTclustered gi|371782086|emb|HE610118.1| 138176 g5652 i0 99.369 100.145110410095 634 4 100 0 1 634 2786 2153 Desmochloris halophila 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain UTEX 2073 blastn 63492 1149 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
22272321 22272321 PRJNA615175_P_NODE_3558_length_823_cov_4.106667_g3411_i0 PRJNA615175 3558 823 4.106667 33.79786941 Percursaria percursa 153906 Plants Plants 520 1.89e-142   NTclustered gi|2112329422|gb|MZ911851.1| 153906 g3411 i0 83.478 37.3462940461725 575 77 75 14 66 638 34271 33713 Percursaria percursa mitochondrion, complete genome blastn 30736 520 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Kornmanniaceae Percursaria Percursaria percursa
22272426 22272426 PRJNA615175_P_NODE_9078_length_492_cov_3.312649_g8910_i0 PRJNA615175 9078 492 3.312649 16.29823308 Chlamydomonas reinhardtii 3055 Plants Plants 183 1.63e-41   NTclustered gi|238534981|gb|GQ176399.1| 3055 g8910 i0 77.508 4.54065040650407 329 58 65 14 147 465 456 134 Chlamydomonas reinhardtii clone CNB22 molecular marker mRNA sequence blastn 2234 183 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
23547758 23547758 PRJNA615175_P_NODE_7479_length_552_cov_1.691023_g7314_i0 PRJNA615175 7479 552 1.691023 9.33444696 Trebouxia sp. A1-2 2608996 Plants Plants 182 6.64e-41   NTclustered gi|1825511251|gb|MN642622.1| 2608996 g7314 i0 79.478 1.46557971014493 268 46 48 9 2 265 46936 46674 Trebouxia sp. A1-2 mitochondrion, complete genome blastn 809 182 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
24821338 24821338 PRJNA615175_P_NODE_33860_length_243_cov_0.905882_g33692_i0 PRJNA615175 33860 243 0.905882 2.20129326 Trebouxia sp. A1-2 2608996 Plants Plants 351 1.93e-92   NTclustered gi|1825511251|gb|MN642622.1| 2608996 g33692 i0 96.682 76.1069958847737 211 7 87 0 3 213 81287 81497 Trebouxia sp. A1-2 mitochondrion, complete genome blastn 18494 351 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;