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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA613025" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA613025 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4419155 4419155 PRJNA613025_S_NODE_15044_length_278_cov_2.397380_g14890_i0 PRJNA613025 15044 278 2.39738 6.6647164 Protostelium mycophagum 472931 Evosea other_Eukaryota 93.5 1.51e-14   NTclustered gi|262262904|gb|FJ766447.1| 472931 g14890 i0 78.146 33.5863309352518 151 29 54 4 130 278 1298 1150 Protostelium mycophagum strain HI06-7A-1 small subunit ribosomal RNA gene, partial sequence blastn 9337 93.5 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
6970390 6970390 PRJNA613025_S_NODE_33046_length_162_cov_1.221239_g32892_i0 PRJNA613025 33046 162 1.221239 1.97840718 Acytostelium subglobosum 361139 Evosea other_Eukaryota 91.6 2.86e-14   NTclustered gi|831755297|ref|XM_012892917.1| 1410327 g32892 i0 80.508 26.5802469135802 118 23 73 0 42 159 241 358 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 4306 91.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
9520236 9520236 PRJNA613025_S_NODE_28888_length_171_cov_1.393443_g28734_i0 PRJNA613025 28888 171 1.393443 2.38278753 Cavenderia fasciculata 261658 Evosea other_Eukaryota 207 2.89e-49   NTclustered gi|470240569|ref|XM_004354224.1| 261658 g28734 i0 89.571 255.233918128655 163 17 98 0 1 163 189 351 Cavenderia fasciculata ubiquitin (ubqJ), partial mRNA blastn 43645 207 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
12071294 12071294 PRJNA613025_S_NODE_30430_length_166_cov_3.102564_g30276_i0 PRJNA613025 30430 166 3.102564 5.15025624 Coremiostelium polycephalum 142831 Evosea other_Eukaryota 93.5 8.19e-15   NTclustered gi|85062629|gb|DQ340387.1| 142831 g30276 i0 88.312 48.355421686747 77 9 46 0 74 150 12448 12524 Dictyostelium polycephalum 17S ribosomal RNA, 5.8S ribosomal RNA, and 26S ribosomal RNA genes, complete sequence blastn 8027 93.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales   Coremiostelium Coremiostelium polycephalum
12071432 12071432 PRJNA613025_S_NODE_4750_length_711_cov_4.080060_g4611_i0 PRJNA613025 4750 711 4.08006 29.0092266 Heliamoeba mirabilis 1655001 Evosea other_Eukaryota 239 5.08e-58   NTclustered gi|821394126|gb|KP864095.1| 1655001 g4611 i0 82.042 40.0759493670886 284 47 39 4 175 454 288 571 Heliamoeba mirabilis isolate M134 small subunit ribosomal RNA gene, partial sequence blastn 28494 239 1 Eukaryota Amoebozoa   Evosea Variosea     Heliamoeba Heliamoeba mirabilis
18443853 18443853 PRJNA613025_S_NODE_23975_length_194_cov_1.055172_g23821_i0 PRJNA613025 23975 194 1.055172 2.04703368 Calomyxa metallica 1334518 Evosea other_Eukaryota 198 2.03e-46   NTclustered gi|2287448840|gb|ON693910.1| 1334518 g23821 i0 85.052 90.2680412371134 194 29 100 0 1 194 532 339 Calomyxa metallica voucher MA82942 elongation factor 1-alpha (EF1A) gene, partial cds blastn 17512 198 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Dianemataceae Calomyxa Calomyxa metallica
19718308 19718308 PRJNA613025_S_NODE_22676_length_201_cov_2.111842_g22522_i0 PRJNA613025 22676 201 2.111842 4.24480242 Rostrostelium ellipticum 361140 Evosea other_Eukaryota 89.8 1.33e-13   NTclustered gi|381139239|emb|HE655046.1| 361140 g22522 i0 80.508 0.587064676616915 118 22 58 1 43 159 1037 920 Rostrostelium ellipticum partial 28S rRNA gene, strain ATCC 22247 blastn 118 89.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Rostrostelium Rostrostelium ellipticum
23544260 23544260 PRJNA613025_S_NODE_22839_length_200_cov_2.006623_g22685_i0 PRJNA613025 22839 200 2.006623 4.013246 Cavenderia pseudoaureostipes 3087017 Evosea other_Eukaryota 106 1.32e-18   NTclustered gi|2610379672|gb|OP749982.1| 3087017 g22685 i0 86.869 28.325 99 8 49 5 29 126 58703 58609 Cavenderia pseudoaureostipes strain TH39A mitochondrion, complete genome blastn 5665 106 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia pseudoaureostipes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;