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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA613025" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA613025 · 30 ✖

analysis 1

  • blastn · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
591902 591902 PRJNA613025_S_NODE_27681_length_176_cov_1.393701_g27527_i0 PRJNA613025 27681 176 1.393701 2.45291376 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 187 3.9e-43   NTclustered gi|829190365|ref|XM_001027692.3| 312017 g27527 i0 85.795 5.14772727272727 176 25 100 0 1 176 977 802 Tetrahymena thermophila SB210 ATP synthase F1, alpha subunit partial mRNA blastn 906 187 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
2424028 2424028 PRJNA613025_S_NODE_22962_length_199_cov_16.046667_g22808_i0 PRJNA613025 22962 199 16.046667 31.93286733 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 368 1.51e-97   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g22808 i0 100 101.422110552764 199 0 100 0 1 199 1146 948 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 20183 368 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
3142373 3142373 PRJNA613025_S_NODE_12063_length_337_cov_12.829861_g11909_i0 PRJNA613025 12063 337 12.829861 43.23663157 Trithigmostoma cucullulus 1346499 SAR_Eukaryotes SAR_Eukaryotes 453 7.46e-123   NTclustered gi|759083539|gb|KM222156.1| 1346499 g11909 i0 91.098 95.5905044510386 337 27 100 3 1 337 1194 861 Trithigmostoma cucullulus voucher CXM08110902 large subunit ribosomal RNA gene, partial sequence blastn 32214 453 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Trithigmostoma Trithigmostoma cucullulus
3142505 3142505 PRJNA613025_S_NODE_17283_length_247_cov_1.500000_g17129_i0 PRJNA613025 17283 247 1.5 3.705 Paramecium calkinsi 83916 SAR_Eukaryotes SAR_Eukaryotes 134 7.750000000000001e-27   NTclustered gi|86262122|dbj|AB248243.1| 83916 g17129 i0 76.984 4.0080971659919 252 46 99 11 1 246 279 34 Paramecium calkinsi gene for cytosol-type HSP70, partial cds blastn 990 134 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium calkinsi
4976944 4976944 PRJNA613025_S_NODE_25964_length_184_cov_0.874074_g25810_i0 PRJNA613025 25964 184 0.874074 1.60829616 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 226 8.739999999999996e-55   NTclustered gi|92790165|emb|AJ965268.1| 47892 g25810 i0 89.011 181.402173913043 182 20 99 0 1 182 455 274 Eudiplodinium maggii partial mRNA for Polyubiqutin 1 (polyubiqutin 1 gene) blastn 33378 226 1 Eukaryota Sar   Ciliophora Litostomatea Entodiniomorphida Ophryoscolecidae Eudiplodinium Eudiplodinium maggii
4977075 4977075 PRJNA613025_S_NODE_9304_length_418_cov_4168.265583_g9151_i0 PRJNA613025 9304 418 4168.265583 17423.35013694 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 599 1.1499999999999995e-166   NTclustered gi|512134943|gb|JX178902.1| 1295638 g9151 i0 99.694 77.8540669856459 327 1 78 0 92 418 223 549 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 32543 599 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
7526683 7526683 PRJNA613025_S_NODE_3966_length_815_cov_32.395561_g3834_i0 PRJNA613025 3966 815 32.395561 264.02382215 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 1336 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g3834 i0 96.31 52.9963190184049 813 30 99 0 1 813 32 844 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 43192 1336 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
8244819 8244819 PRJNA613025_S_NODE_21567_length_208_cov_1.603774_g21413_i0 PRJNA613025 21567 208 1.603774 3.33584992 Tetrahymena acanthophora 2704174 SAR_Eukaryotes SAR_Eukaryotes 366 5.73e-97   NTclustered gi|2082965250|gb|MZ827090.1| 2704174 g21413 i0 98.551 64.4807692307692 207 3 99 0 1 207 532 738 Tetrahymena acanthophora isolate NB176 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13412 366 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena acanthophora
8244849 8244849 PRJNA613025_S_NODE_22687_length_201_cov_1.842105_g22533_i0 PRJNA613025 22687 201 1.842105 3.70263105 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 211 2.73e-50   NTclustered gi|110645063|gb|DQ665311.1| 151077 g22533 i0 99.145 11.6965174129353 117 1 58 0 1 117 1089 1205 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 2351 211 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
9519850 9519850 PRJNA613025_S_NODE_12768_length_321_cov_11.080882_g12614_i0 PRJNA613025 12768 321 11.080882 35.56963122 uncultured ciliate 187299 SAR_Eukaryotes SAR_Eukaryotes 531 3.17e-146   NTclustered gi|221185865|gb|FJ577812.1| 187299 g12614 i0 96.573 89.9595015576324 321 10 100 1 1 321 497 816 Uncultured ciliate clone Ivry08 18S ribosomal RNA gene, partial sequence blastn 28877 531 1 Eukaryota Sar   Ciliophora         uncultured ciliate
10077178 10077178 PRJNA613025_S_NODE_10988_length_364_cov_4.885714_g10834_i0 PRJNA613025 10988 364 4.885714 17.78399896 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 119 3.36e-22   NTclustered gi|1083263100|gb|KX982500.1| 5963 g10834 i0 84 27.6126373626374 125 18 34 2 26 149 2737 2860 Stentor coeruleus strain MSU large subunit ribosomal RNA gene, partial sequence blastn 10051 119 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
10077264 10077264 PRJNA613025_S_NODE_22148_length_204_cov_17.787097_g21994_i0 PRJNA613025 22148 204 17.787097 36.28567788 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 350 5.64e-92   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g21994 i0 97.549 104.955882352941 204 5 100 0 1 204 2575 2372 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 21411 350 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
10077399 10077399 PRJNA613025_S_NODE_3788_length_846_cov_27.126725_g3658_i0 PRJNA613025 3788 846 27.126725 229.4920935 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 1439 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g3658 i0 97.396 58.4657210401891 845 22 99 0 1 845 1487 2331 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 49462 1450 0.992413793103448 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
10795988 10795988 PRJNA613025_S_NODE_21569_length_208_cov_1.603774_g21415_i0 PRJNA613025 21569 208 1.603774 3.33584992 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 351 1.6e-92   NTclustered gi|1134929563|gb|KY508246.1| 151077 g21415 i0 97.115 18.1923076923077 208 6 100 0 1 208 317 110 Chilodonella uncinata isolate EL small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 3784 351 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
12071400 12071400 PRJNA613025_S_NODE_3930_length_822_cov_55.780078_g3798_i0 PRJNA613025 3930 822 55.780078 458.51224116 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 1485 0   NTclustered gi|512134943|gb|JX178902.1| 1295638 g3798 i0 99.27 84.7907542579075 822 6 100 0 1 822 1832 1011 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 69698 1485 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
13346028 13346028 PRJNA613025_S_NODE_29671_length_168_cov_1.714286_g29517_i0 PRJNA613025 29671 168 1.714286 2.88000048 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 289 9.879999999999999e-74   NTclustered gi|110645063|gb|DQ665311.1| 151077 g29517 i0 97.619 1.70238095238095 168 4 100 0 1 168 65 232 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 286 289 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
13346263 13346263 PRJNA613025_S_NODE_7511_length_499_cov_3.962222_g7359_i0 PRJNA613025 7511 499 3.962222 19.77148778 Loxophyllum helus 1868453 SAR_Eukaryotes SAR_Eukaryotes 593 6.459999999999997e-165   NTclustered gi|1040783191|gb|KT246095.1| 1868453 g7359 i0 88.317 97.5450901803607 505 46 99 12 2 499 893 395 Loxophyllum helus internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence; macronuclear blastn 48675 593 1 Eukaryota Sar   Ciliophora Litostomatea Pleurostomatida Litonotidae Loxophyllum Loxophyllum helus
13902650 13902650 PRJNA613025_S_NODE_13171_length_312_cov_22.665399_g13017_i0 PRJNA613025 13171 312 22.665399 70.71604488 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 564 3.03e-156   NTclustered gi|1202135013|gb|KY476314.1| 151077 g13017 i0 99.357 98.2980769230769 311 2 99 0 2 312 357 47 Chilodonella uncinata 18S ribosomal RNA gene, partial sequence blastn 30669 564 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
13902763 13902763 PRJNA613025_S_NODE_28311_length_173_cov_15.225806_g28157_i0 PRJNA613025 28311 173 15.225806 26.34064438 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 320 3.61e-83   NTclustered gi|363412153|gb|JN120227.1| 60850 g28157 i0 100 100 173 0 100 0 1 173 797 969 Vorticella convallaria isolate 96Vorsp16 18S ribosomal RNA gene, partial sequence blastn 17300 320 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella convallaria
15894449 15894449 PRJNA613025_S_NODE_11973_length_340_cov_1.402062_g11819_i0 PRJNA613025 11973 340 1.402062 4.7670108 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 595 1.1799999999999996e-165   NTclustered gi|110645063|gb|DQ665311.1| 151077 g11819 i0 98.235 46.7 340 6 100 0 1 340 906 567 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 15878 595 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
16451596 16451596 PRJNA613025_S_NODE_24033_length_193_cov_15.361111_g23879_i0 PRJNA613025 24033 193 15.361111 29.64694423 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 346 6.82e-91   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g23879 i0 98.964 86.9378238341969 193 2 100 0 1 193 1267 1459 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 16779 346 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
20275228 20275228 PRJNA613025_S_NODE_20536_length_215_cov_4.277108_g20382_i0 PRJNA613025 20536 215 4.277108 9.1957822 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 381 2.1299999999999996e-101   NTclustered gi|158147318|gb|EU047813.1| 151077 g20382 i0 100 66.1023255813953 206 0 96 0 10 215 97 302 Chilodonella uncinata strain ATCC 50194 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence; macronuclear blastn 14212 381 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
22268835 22268835 PRJNA613025_S_NODE_18698_length_232_cov_1.114754_g18544_i0 PRJNA613025 18698 232 1.114754 2.58622928 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 180 9.12e-41   NTclustered gi|110277428|gb|DQ662856.1| 151077 g18544 i0 80.769 80.875 234 41 100 4 1 232 1202 971 Chilodonella uncinata heat shock protein 90 gene, partial cds; macronuclear blastn 18763 180 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
22269008 22269008 PRJNA613025_S_NODE_26278_length_182_cov_1.511278_g26124_i0 PRJNA613025 26278 182 1.511278 2.75052596 Paradiophrys zhangi 693907 SAR_Eukaryotes SAR_Eukaryotes 89.8 1.18e-13   NTclustered gi|342161095|gb|JF694060.1| 693907 g26124 i0 86.585 43.9835164835165 82 9 45 2 91 171 1409 1489 Paradiophrys zhangi voucher JJM2008111201 28S ribosomal RNA gene, partial sequence blastn 8005 89.8 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Uronychiidae Paradiophrys Paradiophrys zhangi
22826106 22826106 PRJNA613025_S_NODE_20658_length_214_cov_21.327273_g20504_i0 PRJNA613025 20658 214 21.327273 45.64036422 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 377 2.74e-100   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g20504 i0 100 95.6355140186916 204 0 95 0 11 214 2564 2767 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 20466 377 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
22826171 22826171 PRJNA613025_S_NODE_27518_length_177_cov_1.187500_g27364_i0 PRJNA613025 27518 177 1.1875 2.101875 Loxophyllum 39458 SAR_Eukaryotes SAR_Eukaryotes 318 1.34e-82   NTclustered gi|762827|gb|L26448.1|LPHRRDA 39459 g27364 i0 99.429 98.9152542372881 175 1 99 0 1 175 1306 1480 Loxophyllum utriculariae ribosomal RNA small subunit blastn 17508 318 1 Eukaryota Sar   Ciliophora Litostomatea Pleurostomatida Litonotidae Loxophyllum Loxophyllum utriculariae
24100546 24100546 PRJNA613025_S_NODE_13219_length_312_cov_1.741445_g13065_i0 PRJNA613025 13219 312 1.741445 5.4333084 Helicoprorodontidae 1607782 SAR_Eukaryotes SAR_Eukaryotes 137 7.83e-28   NTclustered gi|375305434|gb|JF975394.1| 652932 g13065 i0 90.385 39.3525641025641 104 10 33 0 17 120 309 206 Trachelotractus entzi isolate LWW07033111 28S ribosomal RNA gene, partial sequence blastn 12278 137 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida   Trachelotractus Trachelotractus entzi
24100548 24100548 PRJNA613025_S_NODE_13339_length_309_cov_3.826923_g13185_i0 PRJNA613025 13339 309 3.826923 11.82519207 Helicoprorodon 1607783 SAR_Eukaryotes SAR_Eukaryotes 202 2.71e-47   NTclustered gi|759083485|gb|KM222102.1| 1607784 g13185 i0 78.797 79.6407766990291 316 56 100 11 1 309 1325 1636 Helicoprorodon maximus voucher XY2010100902 small subunit ribosomal RNA gene, partial sequence blastn 24609 202 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida Helicoprorodontidae Helicoprorodon Helicoprorodon maximus
24817937 24817937 PRJNA613025_S_NODE_17980_length_239_cov_1.452632_g17826_i0 PRJNA613025 17980 239 1.452632 3.47179048 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 398 2.4e-106   NTclustered gi|110645063|gb|DQ665311.1| 151077 g17826 i0 96.653 47.8117154811715 239 8 100 0 1 239 544 306 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 11427 398 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
25375017 25375017 PRJNA613025_S_NODE_10000_length_394_cov_25.478261_g9847_i0 PRJNA613025 10000 394 25.478261 100.38434834 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 278 5.71e-70   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g9847 i0 98.113 2.01522842639594 159 3 40 0 8 166 2924 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 794 278 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;