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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA611476" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA611476 · 13 ✖

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
589946 589946 PRJNA611476_P_NODE_76561_length_254_cov_1.243094_g75770_i0 PRJNA611476 76561 254 1.243094 3.15745876 Halobaculum marinum 3031996 Archaea Archaea 52.8 0.023   NTclustered gi|2463608140|gb|CP119989.1| 3031996 g75770 i0 100 0.110236220472441 28 0 11 0 145 172 1958609 1958636 Halobaculum marinum strain DT55 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum marinum
6967636 6967636 PRJNA611476_P_NODE_28266_length_385_cov_1.233974_g27475_i0 PRJNA611476 28266 385 1.233974 4.7507999 Haloarcula litorea 3032579 Archaea Archaea 54.7 0.01   NTclustered gi|2463595526|gb|CP119779.1| 3032579 g27475 i0 100 0.0753246753246753 29 0 8 0 37 65 2316680 2316708 Haloarcula litorea strain GDY20 chromosome, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula litorea
8242293 8242293 PRJNA611476_P_NODE_21527_length_431_cov_1.290503_g20736_i0 PRJNA611476 21527 431 1.290503 5.56206793 Haladaptatus salinisoli 2884876 Archaea Archaea 54.7 0.012   NTclustered gi|2124061132|gb|CP085327.1| 2884876 g20736 i0 100 0.327146171693735 29 0 7 0 72 100 2813507 2813479 Haladaptatus salinisoli strain PSR8 chromosome, complete genome blastn 141 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Haladaptatus Haladaptatus salinisoli
9517946 9517946 PRJNA611476_P_NODE_52748_length_301_cov_1.013158_g51957_i0 PRJNA611476 52748 301 1.013158 3.04960558 Halomarina litorea 2961595 Archaea Archaea 52.8 0.028   NTclustered gi|2270268913|gb|CP100449.1| 2961595 g51957 i0 100 0.0930232558139535 28 0 9 0 127 154 197409 197382 Halomarina litorea strain BCD28 plasmid unnamed1, complete sequence blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halomarina Halomarina litorea
10794374 10794374 PRJNA611476_P_NODE_90749_length_248_cov_0.880000_g89958_i0 PRJNA611476 90749 248 0.88 2.1824 Vulcanisaeta souniana 164452 Archaea Archaea 58.4 4.82e-4   NTclustered gi|2314964910|dbj|AP026830.1| 1293586 g89958 i0 97.059 0.282258064516129 34 1 14 0 118 151 1565066 1565033 Vulcanisaeta souniana JCM 11219 DNA, complete genome blastn 70 58.4 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta souniana
13344204 13344204 PRJNA611476_P_NODE_88051_length_249_cov_0.875000_g87260_i0 PRJNA611476 88051 249 0.875 2.17875 uncultured marine thaumarchaeote AD1000_100_C06 1455887 Archaea Archaea 455 1.47e-123   NTclustered gi|663500052|gb|KF900324.1| 1455887 g87260 i0 99.598 1 249 1 100 0 1 249 29942 29694 Uncultured marine thaumarchaeote AD1000_100_C06 genomic sequence blastn 249 455 1 Archaea   Thermoproteati Nitrososphaerota         uncultured marine thaumarchaeote AD1000_100_C06
14618345 14618345 PRJNA611476_P_NODE_35012_length_354_cov_1.565836_g34221_i0 PRJNA611476 35012 354 1.565836 5.54305944 Halobaculum sp. CBA1158 2904243 Archaea Archaea 58.4 7.2e-4   NTclustered gi|2176093559|gb|CP090371.1| 2904243 g34221 i0 97.059 0.096045197740113 34 1 10 0 78 111 667977 667944 Halobaculum sp. CBA1158 chromosome, complete genome blastn 34 58.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum sp. CBA1158
14618801 14618801 PRJNA611476_P_NODE_69712_length_267_cov_1.304124_g68921_i0 PRJNA611476 69712 267 1.304124 3.48201108 Natronosalvus caseinilyticus 2953747 Archaea Archaea 52.8 0.024   NTclustered gi|2006550273|gb|CP071596.1| 2953747 g68921 i0 100 0.104868913857678 28 0 10 0 67 94 140828 140801 Natronosalvus caseinilyticus strain KZCA101 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronosalvus Natronosalvus caseinilyticus
15892906 15892906 PRJNA611476_P_NODE_75733_length_255_cov_1.692308_g74942_i0 PRJNA611476 75733 255 1.692308 4.3153854 Haloglomus salinum 2962673 Archaea Archaea 58.4 4.98e-4   NTclustered gi|2273560668|gb|CP101153.1| 2962673 g74942 i0 97.059 0.133333333333333 34 1 13 0 135 168 941651 941618 Haloglomus salinum strain ZY58 chromosome, complete genome blastn 34 58.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Haloglomus Haloglomus salinum
17167169 17167169 PRJNA611476_P_NODE_31454_length_369_cov_1.253378_g30663_i0 PRJNA611476 31454 369 1.253378 4.62496482 Salinirubellus litoreus 3131999 Archaea Archaea 71.3 9.68e-8   NTclustered gi|2700494409|gb|CP147841.1| 3131999 g30663 i0 87.097 0.569105691056911 62 8 17 0 198 259 2706259 2706320 Salinirubellus litoreus strain SYNS196 chromosome, complete genome blastn 210 71.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Salinirubellus Salinirubellus litoreus
18999204 18999204 PRJNA611476_P_NODE_26535_length_395_cov_0.760870_g25744_i0 PRJNA611476 26535 395 0.76087 3.0054365 Halorubrum 56688 Archaea Archaea 52.8 0.038   NTclustered gi|1041620700|dbj|AP017569.1| 29284 g25744 i0 96.774 0.306329113924051 31 1 8 0 213 243 482810 482780 Halorubrum trapanicum DNA, complete genome, strain: CBA1232 blastn 121 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum trapanicum
20274287 20274287 PRJNA611476_P_NODE_34036_length_358_cov_1.350877_g33245_i0 PRJNA611476 34036 358 1.350877 4.83613966 Haloferax 2251 Archaea Archaea 54.7 0.009   NTclustered gi|2890410411|gb|CP177203.1| 3388425 g33245 i0 87.755 0.273743016759777 49 2 13 3 95 141 806337 806383 Haloferax sp. YSMS24 chromosome, complete genome blastn 98 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax sp. YSMS24
25374417 25374417 PRJNA611476_P_NODE_62160_length_281_cov_1.379808_g61369_i0 PRJNA611476 62160 281 1.379808 3.87726048 root 1 Root_unresolved Root_unresolved 58.4 5.57e-4   NTclustered gi|1804090075|gb|CP048032.1| 1071085 g61369 i0 100 2.61565836298932 31 0 11 0 251 281 1277061 1277031 Haloarchaeon 3A1-DGR strain 3A1-DGR chromosome, complete genome blastn 735 58.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     haloarchaeon 3A1-DGR

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;