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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA611476" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA611476 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10794343 10794343 PRJNA611476_P_NODE_88889_length_249_cov_0.875000_g88098_i0 PRJNA611476 88889 249 0.875 2.17875 Philodina roseola 96448 Rotifera other_Eukaryota 327 3.34e-85   NTclustered gi|183178937|gb|EU432547.1| 96448 g88098 i0 90.4 4.76706827309237 250 22 100 2 1 249 30711 30959 Philodina roseola TAR protein gene, partial cds; U1-like Zn-finger-containing protein (U1Zn_1), unknown (PruORF0001_1), unknown (PrPCG0001_1), methione sulfide reductase B (MSRB_1), Strabismus, serine-threonin kinase copy 1, plasma membrane calcium-dependent ATPase (CAse_1), myosin essential light chain (MELC_1), and 82 kDa heat shock protein (hsp82_1) genes, complete cds; FBoxLRR_1 gene, complete sequence; and TPRA_1 (TPRA_1) gene, complete cds blastn 1187 327 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
12068792 12068792 PRJNA611476_P_NODE_38250_length_343_cov_0.996296_g37459_i0 PRJNA611476 38250 343 0.996296 3.41729528 Philodina sp. NPS-2005 317012 Rotifera other_Eukaryota 381 3.639999999999999e-101   NTclustered gi|62362199|gb|AY942839.1| 317012 g37459 i0 86.589 27.7172011661808 343 46 100 0 1 343 148 490 Philodina sp. NPS-2005 S14e ribosomal protein-like protein mRNA, complete cds blastn 9507 381 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina sp. NPS-2005
12069555 12069555 PRJNA611476_P_NODE_9410_length_634_cov_1.698752_g8628_i0 PRJNA611476 9410 634 1.698752 10.77008768 Lecane closterocerca 1213203 Rotifera other_Eukaryota 682 0   NTclustered gi|401880205|gb|JX216670.1| 1213203 g8628 i0 86.688 96.2034700315457 616 80 97 2 20 634 2 616 Lecane closterocerca voucher ECOCHZ-AG0915.1 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial blastn 60993 682 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane closterocerca
13344005 13344005 PRJNA611476_P_NODE_7331_length_716_cov_4.519440_g6564_i0 PRJNA611476 7331 716 4.51944 32.3591904 Philodina citrina 468664 Rotifera other_Eukaryota 837 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g6564 i0 87.989 21.9804469273743 716 77 99 6 5 716 2399 1689 Philodina citrina complete mitochondrial genome blastn 15738 837 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
14618140 14618140 PRJNA611476_P_NODE_20232_length_443_cov_1.456757_g19441_i0 PRJNA611476 20232 443 1.456757 6.45343351 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 507 7.61e-139   NTclustered gi|402761791|gb|JX184027.1| 104788 g19441 i0 87.416 24.2708803611738 445 51 100 5 1 443 493 52 Macrotrachela quadricornifera isolate MQ cytochrome b (CYTB) gene, complete cds; mitochondrial blastn 10752 507 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
18441189 18441189 PRJNA611476_P_NODE_17895_length_468_cov_1.556962_g17105_i0 PRJNA611476 17895 468 1.556962 7.28658216 Philodina citrina 468664 Rotifera other_Eukaryota 424 8.37e-114   NTclustered gi|407227484|emb|FR856884.1| 468664 g17105 i0 83.516 3.97008547008547 455 73 97 2 15 468 10155 9702 Philodina citrina complete mitochondrial genome blastn 1858 424 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
18441194 18441194 PRJNA611476_P_NODE_1815_length_1464_cov_2.744069_g1323_i0 PRJNA611476 1815 1464 2.744069 40.17317016 Habrotrocha constricta 104786 Rotifera other_Eukaryota 1766 0   NTclustered gi|402761741|gb|JX184002.1| 104786 g1323 i0 88.464 47.5696721311475 1465 166 99 3 1 1463 1531 68 Habrotrocha constricta cytochrome c oxidase subunit 1 (COX1) gene, partial cds; mitochondrial blastn 69642 1766 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
19715808 19715808 PRJNA611476_P_NODE_25056_length_404_cov_1.516616_g24265_i0 PRJNA611476 25056 404 1.516616 6.12712864 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 272 2.73e-68   NTclustered gi|402761877|gb|JX184070.1| 104788 g24265 i0 79.208 9.03217821782178 404 74 99 10 1 399 534 932 Macrotrachela quadricornifera isolate MM NADH dehydrogenase subunit 5 (ND5) gene, complete cds; mitochondrial blastn 3649 272 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
21549903 21549903 PRJNA611476_P_NODE_50677_length_306_cov_1.321888_g49886_i0 PRJNA611476 50677 306 1.321888 4.04497728 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 355 1.94e-93   NTclustered gi|209867641|gb|EU637019.1| 96448 g49886 i0 87.582 29.9607843137255 306 38 100 0 1 306 26975 27280 Philodina roseola tyramine beta hydroxylase-like protein, metallophosphoesterase domain containing 1-like protein, transmembrane protein 45b-like protein, solute carrier family 7-like protein, G protein-coupled receptor-like protein, serpin 6 precursor, molybdenum cofactor-like protein, hypothetical protein, ankyrin repeat containing protein, neuronal calcium sensor family member 2-like protein, HSP70-like protein, hypothetical protein, Hox-5b, Smc-like protein, and golgi autoantigen golgin subfamily a4-like protein genes, complete cds blastn 9168 355 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;