RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA611476" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA611476 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
588890 588890 PRJNA611476_P_NODE_106681_length_244_cov_0.900585_g105890_i0 PRJNA611476 106681 244 0.900585 2.1974274 Rhodothermales bacterium 2306054 Bacteria Bacteria 265 2.6e-66   NTclustered gi|2518550857|emb|OX638318.1| 2306054 g105890 i0 86.667 143.758196721311 240 30 98 2 4 241 1466380 1466619 MAG: Rhodothermales bacterium isolate 55cba9af-49f2-4dbc-822e-66a085d3a702 genome assembly, chromosome: 1 blastn 35077 265 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
5693709 5693709 PRJNA611476_P_NODE_89245_length_248_cov_1.468571_g88454_i0 PRJNA611476 89245 248 1.468571 3.64205608 Rhodothermus marinus 29549 Bacteria Bacteria 453 5.2600000000000005e-123   NTclustered gi|345111121|gb|CP003029.1| 762570 g88454 i0 99.597 17.2943548387097 248 1 100 0 1 248 131713 131466 Rhodothermus marinus SG0.5JP17-172, complete genome blastn 4289 453 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae Rhodothermus Rhodothermus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;