RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA611476" and tax_phylum = "Gastrotricha"

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tax_superkingdom 1

tax_phylum 1

  • Gastrotricha · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA611476 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15893243 15893243 PRJNA611476_P_NODE_9813_length_622_cov_1.109290_g9029_i0 PRJNA611476 9813 622 1.10929 6.8997838 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 520 1.41e-142   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g9029 i0 81.833 3.28295819935691 622 109 99 4 2 621 10932 10313 Lepidodermella squamata mitochondrion, complete genome blastn 2042 520 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
18441421 18441421 PRJNA611476_P_NODE_3495_length_1047_cov_6.217659_g2853_i0 PRJNA611476 3495 1047 6.217659 65.09888973 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 1613 0   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g2853 i0 94.566 12.1222540592168 1049 47 99 7 2 1044 8416 9460 Lepidodermella squamata mitochondrion, complete genome blastn 12692 1613 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;