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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA611476" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 18 ✖

tax_clade 1

bioproject 1

  • PRJNA611476 · 18 ✖

analysis 1

  • blastn · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
588889 588889 PRJNA611476_P_NODE_106661_length_244_cov_0.900585_g105870_i0 PRJNA611476 106661 244 0.900585 2.1974274 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 235 2.0399999999999997e-57   NTclustered gi|470444865|ref|XM_004339756.1| 1257118 g105870 i0 98.496 0.545081967213115 133 2 55 0 112 244 2081 1949 Acanthamoeba castellanii str. Neff proline-tRNA ligase (ACA1_066120), partial mRNA blastn 133 235 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2423431 2423431 PRJNA611476_P_NODE_69962_length_266_cov_4.461140_g69171_i0 PRJNA611476 69962 266 4.46114 11.8666324 root 1 Root_unresolved Root_unresolved 492 1.2099999999999999e-134   NTclustered gi|909719646|gb|KT185626.1| 5755 g69171 i0 100 51.1654135338346 266 0 100 0 1 266 3689 3954 Acanthamoeba castellanii 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 13610 492 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5692719 5692719 PRJNA611476_P_NODE_14165_length_522_cov_1.574610_g13375_i0 PRJNA611476 14165 522 1.57461 8.2194642000000009 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 276 2.79e-69   NTclustered gi|470455792|ref|XM_004340949.1| 1257118 g13375 i0 79.798 24.9636015325671 396 66 75 10 134 522 239 627 Acanthamoeba castellanii str. Neff fatty acid betaoxidation-related protein (ACA1_233000), partial mRNA blastn 13031 276 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6967436 6967436 PRJNA611476_P_NODE_15726_length_497_cov_5.962264_g14936_i0 PRJNA611476 15726 497 5.962264 29.63245208 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 787 0   NTclustered gi|300078498|gb|GU001160.1| 5755 g14936 i0 95.238 12.770623742454699 504 13 100 7 1 497 5429 5928 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6347 787 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10793442 10793442 PRJNA611476_P_NODE_24429_length_408_cov_3.217910_g23638_i0 PRJNA611476 24429 408 3.21791 13.1290728 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 58.4 8.42e-4   NTclustered gi|470476123|ref|XM_004342177.1| 1257118 g23638 i0 94.595 0.0906862745098039 37 2 9 0 260 296 946 910 Acanthamoeba castellanii str. Neff CUE domain containing protein (ACA1_115360), partial mRNA blastn 37 58.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10793505 10793505 PRJNA611476_P_NODE_28469_length_384_cov_1.147910_g27678_i0 PRJNA611476 28469 384 1.14791 4.4079744 Cochliopodium spiniferum 313558 Discosea other_Eukaryota 337 9.029999999999998e-88   NTclustered gi|330902904|gb|JF298276.1| 313558 g27678 i0 85.196 85.0520833333333 331 46 86 3 56 384 438 109 Cochliopodium spiniferum clone 5105 actin gene, partial cds blastn 32660 337 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium spiniferum
10793827 10793827 PRJNA611476_P_NODE_53189_length_299_cov_6.132743_g52398_i0 PRJNA611476 53189 299 6.132743 18.33690157 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 514 2.95e-141   NTclustered gi|300078498|gb|GU001160.1| 5755 g52398 i0 97.667 11.9264214046823 300 5 100 2 1 299 6756 7054 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 3566 514 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12068182 12068182 PRJNA611476_P_NODE_101350_length_245_cov_0.895349_g100559_i0 PRJNA611476 101350 245 0.895349 2.19360505 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 420 5.26e-113   NTclustered gi|470520125|ref|XM_004353504.1| 1257118 g100559 i0 97.551 1 245 6 100 0 1 245 867 1111 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_144190), partial mRNA blastn 245 420 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12068448 12068448 PRJNA611476_P_NODE_13730_length_530_cov_1.321663_g12940_i0 PRJNA611476 13730 530 1.321663 7.0048139 Vannella persistens 303303 Discosea other_Eukaryota 979 0   NTclustered gi|165968548|gb|EU377588.1| 303303 g12940 i0 100 89.8716981132075 530 0 100 0 1 530 708 179 Vannella persistens strain CRIB69 18S ribosomal RNA gene, partial sequence blastn 47632 979 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella persistens
13343902 13343902 PRJNA611476_P_NODE_66271_length_273_cov_3.270000_g65480_i0 PRJNA611476 66271 273 3.27 8.9271 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 401 2.1599999999999994e-107   NTclustered gi|300078498|gb|GU001160.1| 5755 g65480 i0 92.708 3.52014652014652 288 5 100 12 1 273 6441 6155 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 961 401 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14618707 14618707 PRJNA611476_P_NODE_63032_length_279_cov_5.334951_g62241_i0 PRJNA611476 63032 279 5.334951 14.88451329 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 422 1.6999999999999998e-113   NTclustered gi|300078498|gb|GU001160.1| 5755 g62241 i0 94.737 22.6021505376344 266 14 95 0 14 279 7831 7566 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6306 422 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17167678 17167678 PRJNA611476_P_NODE_67354_length_272_cov_0.824121_g66563_i0 PRJNA611476 67354 272 0.824121 2.24160912 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 198 3.03e-46   NTclustered gi|470448855|ref|XM_004340154.1| 1257118 g66563 i0 80.755 7.41176470588235 265 41 96 9 12 271 2377 2636 Acanthamoeba castellanii str. Neff premRNA-splicing factor ATP-dependent RNA helicase PRP16, putative (ACA1_369140), partial mRNA blastn 2016 198 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18441180 18441180 PRJNA611476_P_NODE_17215_length_476_cov_2.158809_g16425_i0 PRJNA611476 17215 476 2.158809 10.27593084 Vannellidae sp. 2491907 Discosea other_Eukaryota 224 9.279999999999999e-54   NTclustered gi|1523769313|gb|MH535955.1| 2491907 g16425 i0 80.583 34.9621848739496 309 44 64 12 65 370 405 700 Vannellidae sp. strain 147SVA_C2 18S ribosomal RNA gene, partial sequence; mitochondrial blastn 16642 224 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae   Vannellidae sp.
18442151 18442151 PRJNA611476_P_NODE_89435_length_248_cov_1.280000_g88644_i0 PRJNA611476 89435 248 1.28 3.1744 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 172 1.6499999999999999e-38   NTclustered gi|470418521|ref|XM_004337050.1| 1257118 g88644 i0 80.909 11.3911290322581 220 40 88 2 28 246 67 285 Acanthamoeba castellanii str. Neff cyclophylin, putative (ACA1_215460), partial mRNA blastn 2825 172 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19716278 19716278 PRJNA611476_P_NODE_61396_length_282_cov_1.866029_g60605_i0 PRJNA611476 61396 282 1.866029 5.26220178 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 100 9.16e-17   NTclustered gi|470375882|ref|XM_004333185.1| 1257118 g60605 i0 90.667 6.18794326241135 75 7 27 0 207 281 231 157 Acanthamoeba castellanii str. Neff ubiquitin domain containing protein (ACA1_389410), partial mRNA blastn 1745 100 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22266250 22266250 PRJNA611476_P_NODE_16718_length_483_cov_4.007317_g15928_i0 PRJNA611476 16718 483 4.007317 19.35534111 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 283 1.53e-71   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g15928 i0 84.859 25.120082815735 284 39 58 4 90 371 21 302 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 12133 283 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24099471 24099471 PRJNA611476_P_NODE_118979_length_229_cov_3.333333_g118188_i0 PRJNA611476 118979 229 3.333333 7.63333257 Acanthamoeba 5754 Discosea other_Eukaryota 424 3.76e-114   NTclustered gi|507399|gb|U07403.1|ACU07403 5755 g118188 i0 100 100.043668122271 229 0 100 0 1 229 1861 2089 Acanthamoeba castellanii CDC:0786:V042 18S rRNA gene blastn 22910 424 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24815917 24815917 PRJNA611476_P_NODE_54400_length_296_cov_2.497758_g53609_i0 PRJNA611476 54400 296 2.497758 7.39336368 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 217 9.21e-52   NTclustered gi|470521480|ref|XM_004353671.1| 1257118 g53609 i0 90.361 46.9864864864865 166 14 56 2 5 169 145 309 Acanthamoeba castellanii str. Neff 60S ribosomal protein L27a, putative (ACA1_376690), partial mRNA blastn 13908 217 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;