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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA611476" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA611476 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
589601 589601 PRJNA611476_P_NODE_49661_length_309_cov_0.978814_g48870_i0 PRJNA611476 49661 309 0.978814 3.02453526 Rhizophydiales sp. 2011922 Fungi Fungi 52.8 0.029   NTclustered gi|2468790959|gb|OQ702906.1| 2011922 g48870 i0 100 0.0906148867313916 28 0 9 0 181 208 4191 4164 Rhizophydiales sp. isolate PSC196 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales     Rhizophydiales sp.
589636 589636 PRJNA611476_P_NODE_51921_length_303_cov_1.004348_g51130_i0 PRJNA611476 51921 303 1.004348 3.04317444 Polychytrium aggregatum 110093 Fungi Fungi 226 1.5699999999999995e-54   NTclustered gi|2432157894|ref|XM_053108463.1| 110093 g51130 i0 80.399 38.2343234323432 301 55 99 4 1 299 464 166 Polychytrium aggregatum ribosomal protein L4 domain-containing protein (BJ171DRAFT_461012), mRNA blastn 11585 226 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
6967763 6967763 PRJNA611476_P_NODE_36866_length_347_cov_2.131387_g36075_i0 PRJNA611476 36866 347 2.131387 7.39591289 Polychytrium aggregatum 110093 Fungi Fungi 211 5.12e-50   NTclustered gi|2432132283|ref|XM_053107992.1| 110093 g36075 i0 80.142 33.6167146974063 282 56 81 0 57 338 168 449 Polychytrium aggregatum 13 kDa ribonucleoprotein-associated protein (BJ171DRAFT_438086), mRNA blastn 11665 211 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
7525420 7525420 PRJNA611476_P_NODE_12326_length_557_cov_6.020661_g11539_i0 PRJNA611476 12326 557 6.020661 33.53508177 Fungi 4751 Fungi Fungi 206 3.98e-48   NTclustered gi|2432143272|ref|XM_053110602.1| 110093 g11539 i0 87.931 28.4955116696589 174 21 31 0 280 453 350 177 Polychytrium aggregatum 40S ribosomal protein S28 (BJ171DRAFT_500751), mRNA blastn 15872 206 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
7525717 7525717 PRJNA611476_P_NODE_43006_length_327_cov_3.724409_g42215_i0 PRJNA611476 43006 327 3.724409 12.17881743 Gallinipes 2304323 Fungi Fungi 324 5.9e-84   NTclustered gi|1866582577|gb|MT730752.1| 117822 g42215 i0 85.449 99.6024464831804 323 34 98 6 6 327 4073 4383 Gallinipes pseudodichotomus isolate JEL0583 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 32570 324 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Gallinipes Gallinipes pseudodichotomus
8242723 8242723 PRJNA611476_P_NODE_52607_length_301_cov_1.350877_g51816_i0 PRJNA611476 52607 301 1.350877 4.06613977 Spizellomyces punctatus 109760 Fungi Fungi 281 3.28e-71   NTclustered gi|1027029543|ref|XR_001677161.1| 645134 g51816 i0 94.054 75.0332225913621 185 11 61 0 1 185 3853 4037 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11002), rRNA blastn 22585 281 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
13343247 13343247 PRJNA611476_P_NODE_18491_length_461_cov_2.317010_g17701_i0 PRJNA611476 18491 461 2.31701 10.6814161 Polychytrium aggregatum 110093 Fungi Fungi 449 1.36e-121   NTclustered gi|2432131711|ref|XM_053109357.1| 110093 g17701 i0 85.548 91.1344902386117 429 62 93 0 1 429 151 579 Polychytrium aggregatum calmodulin (BJ171DRAFT_488251), mRNA blastn 42013 449 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
18441567 18441567 PRJNA611476_P_NODE_45275_length_321_cov_1.104839_g44484_i0 PRJNA611476 45275 321 1.104839 3.54653319 Polychytrium aggregatum 110093 Fungi Fungi 195 4.73e-45   NTclustered gi|2432142886|ref|XM_053110559.1| 110093 g44484 i0 79.054 74.4610591900312 296 52 90 7 34 321 38 331 Polychytrium aggregatum 60S ribosomal protein L42 (BJ171DRAFT_500193), mRNA blastn 23902 195 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
20991712 20991712 PRJNA611476_P_NODE_32757_length_363_cov_2.020690_g31966_i0 PRJNA611476 32757 363 2.02069 7.3351047 Polychytrium aggregatum 110093 Fungi Fungi 222 2.48e-53   NTclustered gi|2432155310|ref|XM_053111519.1| 110093 g31966 i0 79.808 26.7575757575758 312 57 85 6 55 363 404 96 Polychytrium aggregatum 60S ribosomal protein L23 (BJ171DRAFT_510921), mRNA blastn 9713 222 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
22266455 22266455 PRJNA611476_P_NODE_3018_length_1134_cov_3.472196_g2419_i0 PRJNA611476 3018 1134 3.472196 39.37470264 Polychytrium aggregatum 110093 Fungi Fungi 193 6.52e-44   NTclustered gi|2432152794|ref|XM_053111383.1| 110093 g2419 i0 78.477 6.30952380952381 302 59 26 6 480 778 497 199 Polychytrium aggregatum ribosomal protein L23/L15e core domain-containing protein (BJ171DRAFT_509392), mRNA blastn 7155 193 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
24815823 24815823 PRJNA611476_P_NODE_4700_length_892_cov_2.567766_g3988_i0 PRJNA611476 4700 892 2.567766 22.90447272 Polychytrium aggregatum 110093 Fungi Fungi 287 2.2699999999999996e-72   NTclustered gi|2432149348|ref|XM_053111166.1| 110093 g3988 i0 85.874 32.0179372197309 269 38 30 0 479 747 529 261 Polychytrium aggregatum ribosomal protein S19-domain-containing protein (BJ171DRAFT_506928), mRNA blastn 28560 287 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;