contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA611476" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 588793 | 588793 | PRJNA611476_P_NODE_10041_length_615_cov_2.306273_g9257_i0 | PRJNA611476 | 10041 | 615 | 2.306273 | 14.18357895 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 56.5 | 0.005 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g9257 | i0 | 100 | 0.0487804878048781 | 30 | 0 | 5 | 0 | 287 | 316 | 3579094 | 3579065 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 30 | 56.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 1865678 | 1865678 | PRJNA611476_P_NODE_62062_length_281_cov_1.480769_g61271_i0 | PRJNA611476 | 62062 | 281 | 1.480769 | 4.16096089 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 427 | 3.68e-115 | NTclustered | gi|578016248|gb|CP002190.1| | 765869 | g61271 | i0 | 93.993 | 230.081850533808 | 283 | 15 | 100 | 2 | 1 | 281 | 612904 | 613186 | Bdellovibrio bacteriovorus W, complete genome | blastn | 64653 | 427 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 3140078 | 3140078 | PRJNA611476_P_NODE_20443_length_441_cov_1.255435_g19652_i0 | PRJNA611476 | 20443 | 441 | 1.255435 | 5.53646835 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 749 | 0 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g19652 | i0 | 97.279 | 139.097505668934 | 441 | 12 | 100 | 0 | 1 | 441 | 1292305 | 1292745 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 61342 | 749 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 4417445 | 4417445 | PRJNA611476_P_NODE_71504_length_263_cov_2.210526_g70713_i0 | PRJNA611476 | 71504 | 263 | 2.210526 | 5.81368338 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 448 | 2.6199999999999995e-121 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g70713 | i0 | 97.338 | 3 | 263 | 7 | 100 | 0 | 1 | 263 | 411183 | 411445 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 789 | 448 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 5693682 | 5693682 | PRJNA611476_P_NODE_86545_length_249_cov_0.875000_g85754_i0 | PRJNA611476 | 86545 | 249 | 0.875 | 2.17875 | Halobacteriovorax sp. BALOs_7 | 2109558 | Bacteria | Bacteria | 87.9 | 6.18e-13 | NTclustered | gi|1486380477|gb|CP027772.1| | 2109558 | g85754 | i0 | 86.585 | 20.5301204819277 | 82 | 8 | 33 | 3 | 169 | 249 | 250327 | 250248 | Halobacteriovorax sp. BALOs_7 chromosome, complete genome | blastn | 5112 | 87.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Halobacteriovoraceae | Halobacteriovorax | Halobacteriovorax sp. BALOs_7 | ||
| 8801045 | 8801045 | PRJNA611476_P_NODE_69627_length_267_cov_1.546392_g68836_i0 | PRJNA611476 | 69627 | 267 | 1.546392 | 4.12886664 | Bdellovibrio | 958 | Bacteria | Bacteria | 353 | 5.98e-93 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g68836 | i0 | 90.672 | 148.767790262172 | 268 | 21 | 99 | 3 | 1 | 266 | 783121 | 783386 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 39721 | 353 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 11351836 | 11351836 | PRJNA611476_P_NODE_97369_length_246_cov_0.890173_g96578_i0 | PRJNA611476 | 97369 | 246 | 0.890173 | 2.18982558 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 350 | 7.04e-92 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g96578 | i0 | 92.917 | 82.020325203252 | 240 | 17 | 98 | 0 | 7 | 246 | 1440 | 1679 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 20177 | 350 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 15891881 | 15891881 | PRJNA611476_P_NODE_109373_length_243_cov_0.905882_g108582_i0 | PRJNA611476 | 109373 | 243 | 0.905882 | 2.20129326 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 390 | 4.089999999999999e-104 | NTclustered | gi|1326041851|gb|CP025704.1| | 960 | g108582 | i0 | 95.51 | 2.97942386831276 | 245 | 9 | 100 | 1 | 1 | 243 | 449778 | 449534 | Bacteriovorax stolpii strain DSM 12778 chromosome, complete genome | blastn | 724 | 390 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 19716656 | 19716656 | PRJNA611476_P_NODE_90636_length_248_cov_0.880000_g89845_i0 | PRJNA611476 | 90636 | 248 | 0.88 | 2.1824 | Bdellovibrio sp. SKB1291214 | 1732569 | Bacteria | Bacteria | 171 | 5.94e-38 | NTclustered | gi|2328635023|gb|CP106855.1| | 1732569 | g89845 | i0 | 79.828 | 0.939516129032258 | 233 | 47 | 94 | 0 | 3 | 235 | 1744152 | 1744384 | Bdellovibrio sp. SKB1291214 chromosome, complete genome | blastn | 233 | 171 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. SKB1291214 | ||
| 24099859 | 24099859 | PRJNA611476_P_NODE_51279_length_304_cov_3.770563_g50488_i0 | PRJNA611476 | 51279 | 304 | 3.770563 | 11.46251152 | root | 1 | Root_unresolved | Root_unresolved | 56.5 | 0.002 | NTclustered | gi|2801803968|gb|CP169237.1| | 959 | g50488 | i0 | 97.059 | 4.83881578947368 | 34 | 0 | 11 | 1 | 3 | 35 | 406674 | 406707 | Bdellovibrio bacteriovorus strain Bd3 chromosome, complete genome | blastn | 1471 | 56.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;