RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA611476" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA611476 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6968080 6968080 PRJNA611476_P_NODE_5966_length_791_cov_2.182451_g5218_i0 PRJNA611476 5966 791 2.182451 17.26318741 Parapoxvirus orf 3431389 Viruses Viruses 65.8 1.02e-5   NTclustered gi|2513213494|gb|ON805832.1| 10258 g5218 i0 95.122 0.527180783817952 41 2 5 0 147 187 59108 59068 Orf virus isolate NAV, complete genome blastn 417 65.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf
14618230 14618230 PRJNA611476_P_NODE_26092_length_397_cov_1.506173_g25301_i0 PRJNA611476 26092 397 1.506173 5.97950681 Paramecium bursaria Chlorella virus CVM-1 1278249 Viruses Viruses 56.5 0.003   NTclustered gi|448928121|gb|JX997163.1| 1278249 g25301 i0 100 0.221662468513854 30 0 8 0 151 180 97608 97579 Paramecium bursaria Chlorella virus CVM-1, partial genome blastn 88 56.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Chlorovirus Paramecium bursaria Chlorella virus CVM-1
19716592 19716592 PRJNA611476_P_NODE_84976_length_250_cov_0.870056_g84185_i0 PRJNA611476 84976 250 0.870056 2.17514 Aviadenovirus columbidae 3426523 Viruses Viruses 52.8 0.023   NTclustered gi|1088472350|ref|NC_031503.1| 1907767 g84185 i0 85.714 0.196 49 7 20 0 29 77 34046 33998 Pigeon adenovirus 2 isolate YPDS-Y-V1.A19.11-2013, complete genome blastn 49 52.8 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Aviadenovirus Aviadenovirus columbidae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;