RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA611476" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA611476 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10794451 10794451 PRJNA611476_P_NODE_95789_length_247_cov_0.885057_g94998_i0 PRJNA611476 95789 247 0.885057 2.18609079 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 65.8 2.87e-6   NTclustered gi|2794955596|ref|XM_067864717.1| 2049356 g94998 i0 97.368 8.40080971659919 38 1 15 0 128 165 4344 4381 Monocercomonoides exilis putative RNA recognition motif domain containing protein (MONOS_12121), partial mRNA blastn 2075 65.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
18441757 18441757 PRJNA611476_P_NODE_58775_length_287_cov_1.299065_g57984_i0 PRJNA611476 58775 287 1.299065 3.72831655 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 54.7 0.007   NTclustered gi|2319659066|ref|XM_001309088.2| 412133 g57984 i0 100 0.979094076655052 29 0 10 0 31 59 384 412 Trichomonas vaginalis G3 uncharacterized protein (TVAGG3_0781670), partial mRNA blastn 281 54.7 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;