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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA611476" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 5 ✖

bioproject 1

  • PRJNA611476 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1866206 1866206 PRJNA611476_P_NODE_99402_length_246_cov_0.890173_g98611_i0 PRJNA611476 99402 246 0.890173 2.18982558 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 207 4.48e-49   NTclustered gi|2874254017|emb|OY970342.1| 2212470 g98611 i0 82.114 1 246 40 99 4 1 244 263023 262780 MAG: Candidatus Eisenbacteria bacterium isolate MFD02242.bin.c.1 genome assembly, chromosome: 1 blastn 246 207 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
4417008 4417008 PRJNA611476_P_NODE_39644_length_338_cov_1.162264_g38853_i0 PRJNA611476 39644 338 1.162264 3.92845232 Candidatus Babela massiliensis 673862 Bacteria Bacteria 625 1.4999999999999999e-174   NTclustered gi|258674431|gb|GQ495224.1| 673862 g38853 i0 100 96.0739644970414 338 0 100 0 1 338 1408 1071 Delta proteobacterium BABL1 16S ribosomal RNA gene, partial sequence blastn 32473 625 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales Candidatus Babeliaceae Candidatus Babela Candidatus Babela massiliensis
12069002 12069002 PRJNA611476_P_NODE_52770_length_301_cov_0.978070_g51979_i0 PRJNA611476 52770 301 0.97807 2.9439907 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 52.8 0.028   NTclustered gi|2108141985|gb|CP070725.1| 2306012 g51979 i0 100 0.0930232558139535 28 0 9 0 126 153 62189 62162 MAG: Candidatus Bipolaricaulota bacterium isolate bin446 chromosome blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
17726204 17726204 PRJNA611476_P_NODE_86834_length_249_cov_0.875000_g86043_i0 PRJNA611476 86834 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 449 6.840000000000001e-122   NTclustered gi|619533717|dbj|AB862005.1| 179883 g86043 i0 99.197 99.8714859437751 249 2 100 0 1 249 530 778 Uncultured Candidatus Saccharibacteria bacterium gene for 16S ribosomal RNA, partial sequence, clone: HHS-08tF06 blastn 24868 449 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium
18441760 18441760 PRJNA611476_P_NODE_58955_length_287_cov_1.074766_g58164_i0 PRJNA611476 58955 287 1.074766 3.08457842 Candidatus Babela massiliensis 673862 Bacteria Bacteria 531 2.799999999999999e-146   NTclustered gi|563405083|emb|HG793133.1| 673862 g58164 i0 100 145.442508710801 287 0 100 0 1 287 501984 501698 Candidatus Babela massiliensis strain BABL1 complete genome blastn 41742 531 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales Candidatus Babeliaceae Candidatus Babela Candidatus Babela massiliensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;