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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA611476" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 10 ✖

bioproject 1

  • PRJNA611476 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
589280 589280 PRJNA611476_P_NODE_25881_length_398_cov_5.381538_g25090_i0 PRJNA611476 25881 398 5.381538 21.41852124 Karpovia croatica 2925417 Root_unresolved Root_unresolved 102 3.73e-17   NTclustered gi|2206682173|gb|OM966646.1| 2925417 g25090 i0 87.64 15.3291457286432 89 9 22 2 272 359 6020 6107 Karpovia croatica strain CRO19P6 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6101 102 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Karpovia Karpovia croatica
589749 589749 PRJNA611476_P_NODE_61601_length_282_cov_1.358852_g60810_i0 PRJNA611476 61601 282 1.358852 3.83196264 Thecamonas trahens 529818 Root_unresolved Root_unresolved 167 8.9e-37   NTclustered gi|923129143|ref|XM_013902584.1| 461836 g60810 i0 83.708 47.2482269503546 178 27 63 2 76 252 1792 1968 Thecamonas trahens ATCC 50062 DEAD/DEAH box RNA helicase (AMSG_05329), partial mRNA blastn 13324 167 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
589765 589765 PRJNA611476_P_NODE_62681_length_280_cov_1.449275_g61890_i0 PRJNA611476 62681 280 1.449275 4.05797 Thecamonas trahens 529818 Root_unresolved Root_unresolved 52.8 0.026   NTclustered gi|923124044|ref|XM_013900037.1| 461836 g61890 i0 100 0.1 28 0 10 0 180 207 477 504 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_08435), partial mRNA blastn 28 52.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
8243163 8243163 PRJNA611476_P_NODE_8667_length_660_cov_1.279387_g7892_i0 PRJNA611476 8667 660 1.279387 8.4439542 Thecamonas trahens 529818 Root_unresolved Root_unresolved 67.6 2.35e-6   NTclustered gi|923125467|ref|XM_013900748.1| 461836 g7892 i0 91.837 1.94393939393939 49 2 7 2 1 48 2716 2669 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_07278), partial mRNA blastn 1283 67.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
8243231 8243231 PRJNA611476_P_NODE_9127_length_643_cov_2.056140_g8345_i0 PRJNA611476 9127 643 2.05614 13.2209802 Thecamonas trahens 529818 Root_unresolved Root_unresolved 292 3.46e-74   NTclustered gi|923135942|ref|XM_013905983.1| 461836 g8345 i0 76.88 2.6407465007776 532 113 82 9 82 608 321 847 Thecamonas trahens ATCC 50062 sperm-associated antigen 6 (AMSG_01939), mRNA blastn 1698 292 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
10793461 10793461 PRJNA611476_P_NODE_2549_length_1243_cov_5.332479_g1992_i0 PRJNA611476 2549 1243 5.332479 66.28271397 Thecamonas trahens 529818 Root_unresolved Root_unresolved 62.1 2.11e-4   NTclustered gi|923120088|ref|XM_013898063.1| 461836 g1992 i0 100 0.0265486725663717 33 0 3 0 289 321 82 114 Thecamonas trahens ATCC 50062 CAMKK protein kinase (AMSG_10592), partial mRNA blastn 33 62.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
10793538 10793538 PRJNA611476_P_NODE_30489_length_373_cov_1.540000_g29698_i0 PRJNA611476 30489 373 1.54 5.7442 Thecamonas trahens 529818 Root_unresolved Root_unresolved 62.1 5.9e-5   NTclustered gi|923125776|ref|XM_013900902.1| 461836 g29698 i0 91.304 0.246648793565684 46 2 12 2 27 71 1122 1078 Thecamonas trahens ATCC 50062 hypothetical protein, variant (AMSG_06504), mRNA blastn 92 62.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
17167225 17167225 PRJNA611476_P_NODE_3554_length_1037_cov_3.226141_g2909_i0 PRJNA611476 3554 1037 3.226141 33.45508217 Thecamonas trahens 529818 Root_unresolved Root_unresolved 401 9.069999999999998e-107   NTclustered gi|923126576|ref|XM_013901301.1| 461836 g2909 i0 76.671 39.877531340405 793 144 74 32 1 771 377 1150 Thecamonas trahens ATCC 50062 S-adenosylmethionine synthase (AMSG_06698), mRNA blastn 41353 401 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
18441765 18441765 PRJNA611476_P_NODE_5935_length_793_cov_4.820833_g5188_i0 PRJNA611476 5935 793 4.820833 38.22920569 Thecamonas trahens 529818 Root_unresolved Root_unresolved 139 5.94e-28   NTclustered gi|923136453|ref|XM_013906238.1| 461836 g5188 i0 84.028 0.465321563682219 144 23 18 0 137 280 147 290 Thecamonas trahens ATCC 50062 50S ribosomal protein L36e (AMSG_01644), partial mRNA blastn 369 139 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
23542082 23542082 PRJNA611476_P_NODE_52859_length_300_cov_2.193833_g52068_i0 PRJNA611476 52859 300 2.193833 6.581499 Thecamonas trahens 529818 Root_unresolved Root_unresolved 270 7.08e-68   NTclustered gi|923123076|ref|XM_013899554.1| 461836 g52068 i0 85.075 110.646666666667 268 36 89 4 2 267 4174 3909 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_12222), partial mRNA blastn 33194 270 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;