RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA610520" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 7 ✖

bioproject 1

  • PRJNA610520 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1864286 1864286 PRJNA610520_S_NODE_25062_length_339_cov_8.300752_g24972_i0 PRJNA610520 25062 339 8.300752 28.13954928 Sparrow coronavirus HKU17 1159906 Viruses Viruses 592 1.5299999999999996e-164   NTclustered gi|383081743|ref|NC_016992.1| 1159906 g24972 i0 99.387 93.6106194690265 326 2 96 0 3 328 26083 25758 Sparrow coronavirus HKU17, complete genome blastn 31734 592 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Deltacoronavirus Sparrow coronavirus HKU17
8241373 8241373 PRJNA610520_S_NODE_14687_length_386_cov_5.153355_g14597_i0 PRJNA610520 14687 386 5.153355 19.8919503 Pandoravirus belohorizontensis 2847767 Viruses Viruses 472 2.39e-128   NTclustered gi|2203410818|gb|MZ420562.1| 2847767 g14597 i0 95.578 1 294 13 99 0 3 296 500523 500816 Pandoravirus belohorizontensis, partial genome blastn 386 472 1 Viruses             Pandoravirus Pandoravirus belohorizontensis
10075925 10075925 PRJNA610520_S_NODE_4768_length_491_cov_3.545455_g4680_i0 PRJNA610520 4768 491 3.545455 17.40818405 Pandoravirus 2060084 Viruses Viruses 315 5.53e-81   NTclustered gi|1408259612|ref|NC_037667.1| 2107709 g4680 i0 98.324 1.86965376782077 179 3 93 0 1 179 1644849 1644671 Pandoravirus quercus, complete genome blastn 918 315 1 Viruses             Pandoravirus Pandoravirus quercus
10792652 10792652 PRJNA610520_S_NODE_44829_length_283_cov_3.757143_g44739_i0 PRJNA610520 44829 283 3.757143 10.63271469 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.026   NTclustered gi|9964314|ref|NC_002520.1| 28321 g44739 i0 94.286 0.123674911660777 35 1 12 1 97 130 153475 153509 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei
17166216 17166216 PRJNA610520_S_NODE_34214_length_310_cov_4.628692_g34124_i0 PRJNA610520 34214 310 4.628692 14.3489452 Narnavirus sp. 2587225 Viruses Viruses 71.3 7.99e-8   NTclustered gi|2686256125|emb|OZ008436.1| 2587225 g34124 i0 86.957 10.7258064516129 69 1 20 5 1 61 5 73 Apocryptovirus menelaus Segment 2, partial CDS blastn 3325 71.3 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
20273875 20273875 PRJNA610520_S_NODE_27156_length_332_cov_2.393822_g27066_i0 PRJNA610520 27156 332 2.393822 7.94748904 Anulavirus 413970 Viruses Viruses 603 6.889999999999997e-168   NTclustered gi|1491587341|gb|MG727388.1| 2478911 g27066 i0 99.398 13.8253012048193 332 2 100 0 1 332 1180 1511 Hop yellow virus isolate China segment RNA1, complete sequence blastn 4590 603 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Anulavirus Hop yellow virus
21549290 21549290 PRJNA610520_S_NODE_55997_length_260_cov_2.085561_g55907_i0 PRJNA610520 55997 260 2.085561 5.4224586 root 1 Root_unresolved Root_unresolved 481 2.55e-131   NTclustered gi|2915026475|gb|OR222618.1| 2832643 g55907 i0 100 52.4769230769231 260 0 100 0 1 260 82857 82598 MAG: Caudoviricetes sp. isolate MSP0313 genomic sequence blastn 13644 481 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;