contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA610520" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 588511 | 588511 | PRJNA610520_S_NODE_56941_length_258_cov_2.837838_g56851_i0 | PRJNA610520 | 56941 | 258 | 2.837838 | 7.32162204 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 451 | 1.98e-122 | NTclustered | gi|1723592958|emb|LR584267.1| | 1528099 | g56851 | i0 | 98.438 | 364.56976744186 | 256 | 4 | 99 | 0 | 1 | 256 | 552752 | 553007 | Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1 | blastn | 94059 | 451 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 2422664 | 2422664 | PRJNA610520_S_NODE_11042_length_410_cov_12.884273_g10952_i0 | PRJNA610520 | 11042 | 410 | 12.884273 | 52.8255193 | Cutibacterium | 1912216 | Bacteria | Bacteria | 736 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g10952 | i0 | 100 | 258.034146341463 | 398 | 0 | 97 | 0 | 13 | 410 | 56605 | 56208 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 105794 | 736 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 5692068 | 5692068 | PRJNA610520_S_NODE_49645_length_273_cov_1.540000_g49555_i0 | PRJNA610520 | 49645 | 273 | 1.54 | 4.2042 | Mycobacterium sp. SMC-16 | 3385967 | Bacteria | Bacteria | 472 | 1.62e-128 | NTclustered | gi|2872563150|gb|CP176427.1| | 3385967 | g49555 | i0 | 97.802 | 26.7216117216117 | 273 | 6 | 100 | 0 | 1 | 273 | 3200715 | 3200443 | Mycobacterium sp. SMC-16 chromosome, complete genome | blastn | 7295 | 472 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium sp. SMC-16 | ||
| 11350863 | 11350863 | PRJNA610520_S_NODE_39849_length_295_cov_3.382883_g39759_i0 | PRJNA610520 | 39849 | 295 | 3.382883 | 9.97950485 | Mycetocola | 76634 | Bacteria | Bacteria | 545 | 1.03e-150 | NTclustered | gi|1380445227|gb|CP026949.1| | 2079792 | g39759 | i0 | 100 | 192.010169491525 | 295 | 0 | 100 | 0 | 1 | 295 | 189404 | 189110 | Mycetocola zhujimingii strain 449 = CGMCC 1.16372 chromosome, complete genome | blastn | 56643 | 545 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Mycetocola | Mycetocola zhujimingii | ||
| 12067827 | 12067827 | PRJNA610520_S_NODE_43250_length_287_cov_1.822430_g43160_i0 | PRJNA610520 | 43250 | 287 | 1.82243 | 5.2303741 | Modestobacter italicus | 2732864 | Bacteria | Bacteria | 470 | 6.18e-128 | NTclustered | gi|388483940|emb|FO203431.1| | 2732864 | g43160 | i0 | 96.491 | 360.989547038328 | 285 | 8 | 99 | 2 | 4 | 287 | 4339690 | 4339973 | Modestobacter marinus str. BC501 chromosome, complete genome | blastn | 103604 | 470 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Geodermatophilales | Geodermatophilaceae | Modestobacter | Modestobacter italicus | ||
| 13901386 | 13901386 | PRJNA610520_S_NODE_12791_length_398_cov_2.261538_g12701_i0 | PRJNA610520 | 12791 | 398 | 2.261538 | 9.00092124 | Corynebacterium | 1716 | Bacteria | Bacteria | 676 | 0 | NTclustered | gi|2869858840|gb|CP175793.1| | 3383589 | g12701 | i0 | 98.942 | 336.675879396985 | 378 | 4 | 95 | 0 | 21 | 398 | 724814 | 724437 | Corynebacterium sp. YSMAA1_1_D6 chromosome, complete genome | blastn | 133997 | 676 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sp. YSMAA1_1_D6 | ||
| 15175729 | 15175729 | PRJNA610520_S_NODE_39852_length_295_cov_3.243243_g39762_i0 | PRJNA610520 | 39852 | 295 | 3.243243 | 9.56756685 | Cutibacterium | 1912216 | Bacteria | Bacteria | 545 | 1.03e-150 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g39762 | i0 | 100 | 263.545762711864 | 295 | 0 | 100 | 0 | 1 | 295 | 55825 | 55531 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 77746 | 545 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 17166219 | 17166219 | PRJNA610520_S_NODE_35034_length_308_cov_2.625532_g34944_i0 | PRJNA610520 | 35034 | 308 | 2.625532 | 8.08663856 | Streptacidiphilus sp. PB12-B1b | 2705012 | Bacteria | Bacteria | 54.7 | 0.008 | NTclustered | gi|1886146638|gb|CP048405.1| | 2705012 | g34944 | i0 | 100 | 0.0941558441558442 | 29 | 0 | 9 | 0 | 256 | 284 | 2578194 | 2578222 | Streptacidiphilus sp. PB12-B1b chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptacidiphilus | Streptacidiphilus sp. PB12-B1b | ||
| 18998845 | 18998845 | PRJNA610520_S_NODE_22155_length_350_cov_4.620939_g22065_i0 | PRJNA610520 | 22155 | 350 | 4.620939 | 16.1732865 | Streptomyces | 1883 | Bacteria | Bacteria | 52.8 | 0.033 | NTclustered | gi|2034371340|gb|CP074102.1| | 68239 | g22065 | i0 | 100 | 0.24 | 28 | 0 | 8 | 0 | 292 | 319 | 3071847 | 3071874 | Streptomyces mirabilis strain P16B-1 chromosome, complete genome | blastn | 84 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces mirabilis | ||
| 25373718 | 25373718 | PRJNA610520_S_NODE_42600_length_288_cov_6.148837_g42510_i0 | PRJNA610520 | 42600 | 288 | 6.148837 | 17.70865056 | Streptomyces | 1883 | Bacteria | Bacteria | 108 | 5.61e-19 | NTclustered | gi|924539656|gb|CP011522.1| | 1649184 | g42510 | i0 | 81.618 | 6.70486111111111 | 136 | 19 | 46 | 6 | 78 | 210 | 1295435 | 1295567 | Streptomyces sp. CFMR 7 strain CFMR-7, complete genome | blastn | 1931 | 108 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. CFMR 7 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;