RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA610520" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA610520 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1864286 1864286 PRJNA610520_S_NODE_25062_length_339_cov_8.300752_g24972_i0 PRJNA610520 25062 339 8.300752 28.13954928 Sparrow coronavirus HKU17 1159906 Viruses Viruses 592 1.5299999999999996e-164   NTclustered gi|383081743|ref|NC_016992.1| 1159906 g24972 i0 99.387 93.6106194690265 326 2 96 0 3 328 26083 25758 Sparrow coronavirus HKU17, complete genome blastn 31734 592 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Deltacoronavirus Sparrow coronavirus HKU17
17166216 17166216 PRJNA610520_S_NODE_34214_length_310_cov_4.628692_g34124_i0 PRJNA610520 34214 310 4.628692 14.3489452 Narnavirus sp. 2587225 Viruses Viruses 71.3 7.99e-8   NTclustered gi|2686256125|emb|OZ008436.1| 2587225 g34124 i0 86.957 10.7258064516129 69 1 20 5 1 61 5 73 Apocryptovirus menelaus Segment 2, partial CDS blastn 3325 71.3 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
20273875 20273875 PRJNA610520_S_NODE_27156_length_332_cov_2.393822_g27066_i0 PRJNA610520 27156 332 2.393822 7.94748904 Anulavirus 413970 Viruses Viruses 603 6.889999999999997e-168   NTclustered gi|1491587341|gb|MG727388.1| 2478911 g27066 i0 99.398 13.8253012048193 332 2 100 0 1 332 1180 1511 Hop yellow virus isolate China segment RNA1, complete sequence blastn 4590 603 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Anulavirus Hop yellow virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;