RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA609258" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA609258 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4413995 4413995 PRJNA609258_P_NODE_13824_length_521_cov_1.680804_g13442_i0 PRJNA609258 13824 521 1.680804 8.75698884 Proales similis 360698 Rotifera other_Eukaryota 512 1.95e-140   NTclustered gi|1859640894|gb|MN970216.1| 360698 g13442 i0 84.884 70.852207293666 516 69 98 9 10 521 11953 12463 Proales similis mitochondrion, complete genome blastn 36914 512 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
20990122 20990122 PRJNA609258_P_NODE_50677_length_252_cov_0.871508_g50292_i0 PRJNA609258 50677 252 0.871508 2.19620016 Lecane bulla 96446 Rotifera other_Eukaryota 449 6.94e-122   NTclustered gi|167842618|gb|EU188935.1| 96446 g50292 i0 99.2 96.9047619047619 250 1 99 1 3 252 705 457 Lecane bulla isolate Rio Grande Village cytochrome oxidase subunit I-like (cox1) gene, partial sequence; mitochondrial blastn 24420 449 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;