RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA609258" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA609258 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13342109 13342109 PRJNA609258_P_NODE_60171_length_242_cov_0.923077_g59786_i0 PRJNA609258 60171 242 0.923077 2.23384634 Octopus bimaculoides 37653 Mollusca Mollusca 56.5 0.002   NTclustered gi|2427286230|ref|XM_014925910.2| 37653 g59786 i0 94.444 3.27685950413223 36 2 15 0 141 176 498 463 PREDICTED: Octopus bimaculoides PWWP domain-containing protein 2A (LOC106877115), mRNA blastn 793 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
18439708 18439708 PRJNA609258_P_NODE_49155_length_253_cov_1.733333_g48770_i0 PRJNA609258 49155 253 1.733333 4.38533249 Gigantopelta aegis 1735272 Mollusca Mollusca 189 1.6799999999999996e-43   NTclustered gi|2034282593|ref|XM_041515530.1| 1735272 g48770 i0 80.738 7.34387351778656 244 45 96 2 11 253 73 315 PREDICTED: Gigantopelta aegis dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like (LOC121385006), mRNA blastn 1858 189 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;