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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA609258" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA609258 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
586337 586337 PRJNA609258_P_NODE_12181_length_557_cov_1.719008_g11804_i0 PRJNA609258 12181 557 1.719008 9.57487456 Microsporidium sp. EM.L-11 1821049 Fungi Fungi 625 2.579999999999999e-174   NTclustered gi|1012430364|gb|KT956059.1| 1821049 g11804 i0 86.988 98.6086175942549 561 65 100 7 1 557 804 248 Microsporidium sp. EM.L-11 small subunit ribosomal RNA gene, partial sequence blastn 54925 625 1 Eukaryota Opisthokonta Fungi Microsporidia       Microsporidium Microsporidium sp. EM.L-11
587064 587064 PRJNA609258_P_NODE_31261_length_333_cov_3.892308_g30876_i0 PRJNA609258 31261 333 3.892308 12.96138564 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 544 4.25e-150   NTclustered gi|2522768008|gb|OR162445.1| 646526 g30876 i0 96.131 107.546546546547 336 8 99 3 2 333 3994 3660 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 35813 544 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
3137407 3137407 PRJNA609258_P_NODE_1663_length_1367_cov_14.251932_g1517_i0 PRJNA609258 1663 1367 14.251932 194.82391044 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 1609 0   NTclustered gi|2522768008|gb|OR162445.1| 646526 g1517 i0 89.609 85.1814191660571 1280 114 93 15 16 1283 1273 1 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 116443 1609 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
3138902 3138902 PRJNA609258_P_NODE_59463_length_242_cov_5.526627_g59078_i0 PRJNA609258 59463 242 5.526627 13.37443734 Vittaforma corneae 42399 Fungi Fungi 150 7.509999999999998e-32   NTclustered gi|667639983|ref|XR_552275.1| 993615 g59078 i0 82.857 25.9793388429752 175 22 71 6 1 172 2192 2361 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 6287 150 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
14615728 14615728 PRJNA609258_P_NODE_2232_length_1230_cov_4.998271_g2045_i0 PRJNA609258 2232 1230 4.998271 61.4787333 Endoreticulatus sp. CHW-2004 Taiwan 262393 Fungi Fungi 289 8.790000000000001e-73   NTclustered gi|63095238|gb|AY960111.1| 262393 g2045 i0 72.866 8.88943089430894 1113 200 88 71 1 1079 1159 115 Endoreticulatus sp. CHW-2004 Taiwan large subunit ribosomal RNA gene, complete sequence blastn 10934 289 1 Eukaryota Opisthokonta Fungi Microsporidia       Endoreticulatus Endoreticulatus sp. CHW-2004 Taiwan
16449965 16449965 PRJNA609258_P_NODE_32533_length_326_cov_1.541502_g32148_i0 PRJNA609258 32533 326 1.541502 5.02529652 Microsporidium 144516 Fungi Fungi 270 7.77e-68   NTclustered gi|272477433|gb|FJ756115.1| 698185 g32148 i0 89.72 9.57668711656442 214 19 65 3 4 215 215 3 Microsporidium sp. BPAR14 PAR1 small subunit ribosomal RNA gene, partial sequence blastn 3122 270 1 Eukaryota Opisthokonta Fungi Microsporidia       Microsporidium Microsporidium sp. BPAR14 PAR1
17165973 17165973 PRJNA609258_P_NODE_814_length_1684_cov_24.068901_g747_i0 PRJNA609258 814 1684 24.068901 405.32029284 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 736 0   NTclustered gi|2522768008|gb|OR162445.1| 646526 g747 i0 84.739 12.854513064133 747 100 92 14 928 1667 2468 1729 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21647 736 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
19714071 19714071 PRJNA609258_P_NODE_44876_length_270_cov_1.517766_g44491_i0 PRJNA609258 44876 270 1.517766 4.0979682 Microsporidium sp. PL03 3072851 Fungi Fungi 163 1.1e-35   NTclustered gi|2571792811|gb|OR500624.1| 3072851 g44491 i0 81.731 44.137037037037 208 27 76 8 66 270 1158 959 Microsporidium sp. PL03 isolate AT.p2G4 small subunit ribosomal RNA gene, partial sequence blastn 11917 163 1 Eukaryota Opisthokonta Fungi Microsporidia       Microsporidium Microsporidium sp. PL03

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;